Pairwise Alignments

Query, 160 a.a., KEGG: type VI secretion system secreted protein Hcp from Variovorax sp. SCN45

Subject, 162 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 62.4 bits (150), Expect = 3e-15
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 6/160 (3%)

Query: 4   YLKMPGVTGQTQIEGHKDEMEVQSFQFGAGLAVTSGTSNQE-RTAGKPSFSEITVTRTTD 62
           Y+++  +TG+   + + + +E+  ++FG   + ++  S+    ++G+ + +  T T+  D
Sbjct: 6   YIQIAEITGEALDQQYANWIEIVGYKFGVSQSTSATASSAGGASSGRTTLTNFTFTKYLD 65

Query: 63  SATPQLMQ-KLAGGEVFAGDTIITFPREDKSGLLPLMVVTLTDVILSGFSVSSGGDLPQE 121
           SA+ +L++   AG  +     ++     DK   L    V L +VI++ ++ S+   +P E
Sbjct: 66  SASCKLLEASCAGQHLKEVKLVVCRAGTDK---LKYYEVVLEEVIIADYAQSASSGVPME 122

Query: 122 SISLNYAAIKVEYTKQKE-EGGQEGVAPFGWDLSKNTAVA 160
            + LNY  I   YT+QK  +G   G    GWD   N   A
Sbjct: 123 VVQLNYGRINTTYTRQKRLDGSAGGNVTGGWDRINNKKYA 162