Pairwise Alignments

Query, 160 a.a., KEGG: type VI secretion system secreted protein Hcp from Variovorax sp. SCN45

Subject, 180 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 66.2 bits (160), Expect = 3e-16
 Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 24/174 (13%)

Query: 4   YLKMPGVTGQTQIEGHKDEMEVQSFQFGA-----GLAVTSGTSNQERTAGKPSFSEITVT 58
           Y+++ G+ G+   E HKD +EV  +++GA       A +SG ++ ER A     S+  + 
Sbjct: 14  YIQIDGIPGEVLDEKHKDWIEVLGYEYGATQATSATASSSGGASSERVA----LSDFKIR 69

Query: 59  RTTDSATPQLMQKLAGGEVFAGDTI-ITFPREDKSGLLPLMVVTLTDVILSGFSVSSGG- 116
           +  D A+ +L +    G+  A   + +     DK   +  + + + +V++S     +GG 
Sbjct: 70  KAVDKASAKLFEHCCTGKHIAKLKLNVNRAGGDK---VTYLTIDMEEVVVSSVKFVAGGN 126

Query: 117 ---------DLPQESISLNYAAIKVEYTKQKEEGGQE-GVAPFGWDLSKNTAVA 160
                    DLP E IS N+A IK  YT+Q    GQ  G    GWD + N   A
Sbjct: 127 QSGEDKAVSDLPVEEISFNFARIKTTYTQQNRTDGQAGGNIVGGWDRTANKVFA 180