Pairwise Alignments

Query, 503 a.a., T6SS component TssC (ImpC/VipB) from Variovorax sp. SCN45

Subject, 491 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score =  350 bits (897), Expect = e-101
 Identities = 185/481 (38%), Positives = 279/481 (58%), Gaps = 8/481 (1%)

Query: 22  TTSDMSLLDKIVYEGKMTTEPSQGAYAKKLIGQLASQILDEGMKTSPDKGVVTLINERVA 81
           T    S+LD IV +  ++ +      AK+ +     +++    +  P K    L++  +A
Sbjct: 12  TADQYSILDNIVAQTLLSADDEAYGIAKRGVSAFIEELIKPQNRGEPVKK--RLVDRMIA 69

Query: 82  EIDRLLTDQLNAILHAPEFQALEGSWRGLHDMVFGTETGSNLKLRLLNVSKKDLLKDLET 141
           EID  L+ Q++ ILH P+FQALE SW+GL  +V  T    N+K+ LLN+S++DLL+D E 
Sbjct: 70  EIDTKLSLQMDEILHHPDFQALEASWKGLQLLVDRTNFRENIKIELLNISRQDLLEDFED 129

Query: 142 AVDHDTSVLFKKIYEEEYGTYGGHPYSLLIGDYYFSRHPQDIALLERVSRVAAAAHAPFI 201
           + +   S L+K IY  EYG +GG P   +I +Y+ S    D+ L++  S VA  AHAPFI
Sbjct: 130 SPELTQSGLYKHIYSAEYGQFGGQPVGAIIANYFLSPSAPDVKLMQYASSVACMAHAPFI 189

Query: 202 AAAAPALFDFKSFTELGIPRDLSKTFESAELASWRSFRESEDSRYVSLVLPSYAARLPYG 261
           AAA P  F  +SFT L   +DL   FE  + A W+SFR+SED+RY+ L +P +  R PY 
Sbjct: 190 AAAGPGFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDARYIGLTVPRFLLRTPYD 249

Query: 262 AKTIPVENFNYEEDVDGSDHGKYLWANAAYQLGLRITQAHSMYGWTTAIRGVEGGGKVDG 321
               PV+ F Y+E+V  S H  YLW N AY    R+T + + + W   I G + GG V+ 
Sbjct: 250 PLECPVKTFAYQENVVNS-HEHYLWGNTAYAFATRLTDSFARFRWCPNIIGPQSGGAVED 308

Query: 322 MVAHAYKTDEGDIALKPPTEVTITDRREKELSDLGFIAIVNSKGSNTAAFFGGQTVNKPK 381
           +  H + +  G+I  K PTEV ++DRRE EL+  GFIA+   KGS+ AAFF   +V KPK
Sbjct: 309 LPLHHFHS-MGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSASSVQKPK 367

Query: 382 VY----DKDAANANAAVSARLPYILAASRFAHYLKVIVRDKIGSFQTQADMQKHLNNWVA 437
            +    +   A  N  +  +LPY++  +R AHYLKV+ R+++GS++ + D++  LN W+ 
Sbjct: 368 HFGLSPEGKEAELNYRLGTQLPYMMVVNRLAHYLKVLQREQLGSWKERTDLELELNKWIR 427

Query: 438 NYVLVSPSAPQAMKAKYPLSQARVDVTEVPGKPGSYRAIAFLKPHFQLEELSASIRLVAD 497
            YV    +    ++ + PL  AR+ V++V G+PG YR    ++PHF+      ++ LV  
Sbjct: 428 QYVADQENPSAEVRGRRPLRAARIVVSDVDGEPGWYRVNLSVRPHFKYMGADFTLSLVGK 487

Query: 498 L 498
           L
Sbjct: 488 L 488