Pairwise Alignments

Query, 503 a.a., T6SS component TssC (ImpC/VipB) from Variovorax sp. SCN45

Subject, 496 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  347 bits (889), Expect = e-100
 Identities = 195/491 (39%), Positives = 290/491 (59%), Gaps = 20/491 (4%)

Query: 18  ATTVTTSDMSLLDKIVYEGKMTTEPSQGAYAKKLIGQLASQILDEGMKTS-PDKGVVTLI 76
           AT  T S+ +LLD+I+ E K+   P+Q  Y  ++  Q  S  + E +K++ PD+    LI
Sbjct: 13  ATADTLSNTTLLDQIMAETKLV--PAQEGY--QIARQGVSAFITEILKSNDPDQ----LI 64

Query: 77  NER-----VAEIDRLLTDQLNAILHAPEFQALEGSWRGLHDMVFGTETGSNLKLRLLNVS 131
           N+      +AEIDR+L  Q++AILH PEFQ LE SWR L  +V  T+   N+KL +L+VS
Sbjct: 65  NKHRADQMIAEIDRMLGKQMDAILHQPEFQQLESSWRSLKLLVDRTDFRENIKLEILHVS 124

Query: 132 KKDLLKDLETAVDHDTSVLFKKIYEEEYGTYGGHPYSLLIGDYYFSRHPQDIALLERVSR 191
           K+DLL D E A D   S ++K +Y   YG +GG P + ++G+Y F     DI LL  ++ 
Sbjct: 125 KEDLLDDFENAADVTCSGIYKHVYTAGYGQFGGEPVAAMVGNYNFGPSSPDIKLLSYMAS 184

Query: 192 VAAAAHAPFIAAAAPALFDFKSFTELGIPRDLSKTFESAELASWRSFRESEDSRYVSLVL 251
           V A +HAPF+AA AP  F+  SF EL   +++   F     A WR+FRESED+R+V+L  
Sbjct: 185 VGAMSHAPFLAAPAPEFFNLNSFEELPNLKEIKDLFAGPRHAKWRAFRESEDARHVALTG 244

Query: 252 PSYAARLPYGAKTIPVENFNYEEDVDGSDHGKYLWANAAYQLGLRITQAHSMYGWTTAIR 311
           P +  R  Y  +  P+E+FNY ED+ G  H  YLW N+A+ L   I  + + Y W   I 
Sbjct: 245 PRFMLRSAYHPQEQPIESFNYNEDIAG-QHDNYLWGNSAFLLASCINDSFARYRWCPNII 303

Query: 312 GVEGGGKVDGMVAHAYKTDEGDIALKPPTEVTITDRREKELSDLGFIAIVNSKGSNTAAF 371
           G + GG V+ +  H Y++  G +  K PTEV I+DR+E EL++ GFIA+   K S+ AAF
Sbjct: 304 GPQSGGAVEDLPVHLYES-LGQLQAKIPTEVLISDRKEFELAEEGFIALTMRKDSDNAAF 362

Query: 372 FGGQTVNKPKVYDKD----AANANAAVSARLPYILAASRFAHYLKVIVRDKIGSFQTQAD 427
           F   +V KPK + K      A  N  +  +LPY+   +R AHY+KV+ R++IGS++ + D
Sbjct: 363 FSANSVQKPKHFPKTPEGLQAQTNYKLGTQLPYLFIVNRLAHYIKVLQREQIGSWKERRD 422

Query: 428 MQKHLNNWVANYVLVSPSAPQAMKAKYPLSQARVDVTEVPGKPGSYRAIAFLKPHFQLEE 487
           ++  LN W+  YV    +    ++++ PL  AR++V++V G PG Y+    ++PHF+   
Sbjct: 423 LESELNKWIKQYVADQENPSADVRSRRPLRAARIEVSDVAGDPGWYQVSLAVRPHFKYMG 482

Query: 488 LSASIRLVADL 498
            +  I LV  L
Sbjct: 483 ANFEISLVGRL 493