Pairwise Alignments

Query, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  267 bits (682), Expect = 7e-76
 Identities = 159/468 (33%), Positives = 255/468 (54%), Gaps = 8/468 (1%)

Query: 13  LAAMLVAGCAVGPDYKTPD-TPLPVSWKLEEPWRVSAPNDAADKGPWWRRFGDPQLDALQ 71
           L   L++ C + PDY  P+       +K  E W  ++P+DA  +G WW  +GD  L+AL 
Sbjct: 28  LCVALLSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNALV 87

Query: 72  QQALAGSPTLAIANARLAQARATLAANAAGQYPQVGLGT---RASRLRISANRPLTNYAT 128
           ++    + T+A + A+  QA+A + ++ A  +P + L T   R+++   S++  L+N   
Sbjct: 88  EELNRSNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSN--- 144

Query: 129 PNSTTVQNDFALSLNASYEVDLAGRVQRTVEGAKASAEQSAADLQNTRLLLSADVASSYF 188
            NS+ ++N +   L  S+E+DL G+++ T+   +ASAE S ADL + RL   +++  +Y 
Sbjct: 145 -NSSGIRNTYNAQLGVSWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNYL 203

Query: 189 NLRSTDIELDVVTRSIALQRRALELVTARHDLGAVSGLDVAQQQSLLETTLTQVDVLRKQ 248
            LR  D +  ++  ++A   R+L +   ++  G      VAQ ++ L++T   +  L  Q
Sbjct: 204 QLRVIDEQKRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQ 263

Query: 249 RSQYEHALATLTGTPAPSFSLPVDLREIRPPAVPLGVPSEILQRRPDVASAERAMAAANA 308
           R+Q+E+A+A L G     F+L         P +P+ +PS++L+RRPD+A+AER + AANA
Sbjct: 264 RAQFENAIAVLLGKAPADFALADSKAIPALPQIPVSLPSQLLERRPDIAAAERNVMAANA 323

Query: 309 QIGVATAAFYPSIFISPTVGVDSRTIETLFNGPSLLWSVGVSATQVLFDGGRIRANVDFA 368
            IGV+ AA++P + +S + G  S +       P+  WSVG      LFD G+  A VD  
Sbjct: 324 NIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKRSAEVDRT 383

Query: 369 KAGYDVTVGNYRRTVLTAMQEVEDGITGLSALDSATAQAQAAVTAARRVLDMATSRYEGG 428
            A YD TV  YR+TVL   +EVE+ +  L          Q A+ AAR  L +  ++Y  G
Sbjct: 384 VAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQYRAG 443

Query: 429 ASTYLDVITAQQSLLTVERQAAQLRGQRLLTAVFLVKALGGDWCGDDA 476
              YLDV+  Q + L+ ER    L   RL+ +V LV ALGG W  + A
Sbjct: 444 LIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAEQA 491