Pairwise Alignments

Query, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  216 bits (550), Expect = 1e-60
 Identities = 140/461 (30%), Positives = 227/461 (49%), Gaps = 6/461 (1%)

Query: 13  LAAMLVAGCAVGPDYKTPDTPLPVSWKLEEPWRVSAPNDAADKGPWWRRF-GDPQLDALQ 71
           + A ++ GC++ PDY+TP+ P+   W     +  +   D A     WR+F  DP L  L 
Sbjct: 10  VTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQQLI 69

Query: 72  QQALAGSPTLAIANARLAQARATLAANAAGQYPQVGLGTRASRLRISANRPLTNYATPNS 131
           Q +L  +  L +A   L   RA      A  +P V      SR R+ AN   T     + 
Sbjct: 70  QTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTG---ESG 126

Query: 132 TTVQNDFALSLNASYEVDLAGRVQRTVEGAKASAEQSAADLQNTRLLLSADVASSYFNLR 191
            T Q    L ++A YE+DL GRV+   E A  +   S    ++T++ L A VA++Y+  +
Sbjct: 127 ITSQYSATLGVSA-YELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQ 185

Query: 192 STDIELDVVTRSIALQRRALELVTARHDLGAVSGLDVAQQQSLLETTLTQVDVLRKQRSQ 251
           +      +   ++     +  L    +++G  S LDV+Q ++ +E    +    ++  +Q
Sbjct: 186 ADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQ 245

Query: 252 YEHALATLTGTPAPS-FSLPVDLREIRPPAVPLGVPSEILQRRPDVASAERAMAAANAQI 310
             ++L  L GT  P+  + P++L   +   VP G+PS+ILQRRPD+  AE  + AANA I
Sbjct: 246 DVNSLTVLLGTGIPADLAKPLELDADQLAEVPAGLPSDILQRRPDIQEAEHLLKAANANI 305

Query: 311 GVATAAFYPSIFISPTVGVDSRTIETLFNGPSLLWSVGVSATQVLFDGGRIRANVDFAKA 370
           G A AAF+PSI ++   G  S  +  LF+G    W         +F+ G ++A++D++K 
Sbjct: 306 GAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKI 365

Query: 371 GYDVTVGNYRRTVLTAMQEVEDGITGLSALDSATAQAQAAVTAARRVLDMATSRYEGGAS 430
             D+ V  Y +T+ TA QEV DG+      +      +  V A +    +A  RY  G  
Sbjct: 366 QKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGID 425

Query: 431 TYLDVITAQQSLLTVERQAAQLRGQRLLTAVFLVKALGGDW 471
           + L  + AQ++L + ++     R  +L + V L KALGG W
Sbjct: 426 SNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466