Pairwise Alignments

Query, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 484 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

 Score =  220 bits (561), Expect = 8e-62
 Identities = 155/468 (33%), Positives = 233/468 (49%), Gaps = 13/468 (2%)

Query: 12  LLAAMLVAGCAVGPDYKTPDTPLPVSWK-LEEPWRVSAPNDAADKGPWWRRFGDPQLDAL 70
           LL A+L+ GC +GPD++ PD+  P  W  L+     S P     +  WW  F D +L AL
Sbjct: 10  LLLAVLLTGCTLGPDFQRPDSQAPQQWAPLQGEAAASQPQAEPLELRWWETFHDARLSAL 69

Query: 71  QQQALAGSPTLAIANARLAQARATLAANAAGQYPQVGLGTRASRLRISANRPLTNYATPN 130
            Q+    +  L +A+ARL Q+RA  +  AA + P V +    SR R SA+      + P+
Sbjct: 70  IQRVAERNLDLQMASARLLQSRALRSTLAADEVPSVDVNAGYSRARNSAD----GLSDPS 125

Query: 131 STTVQNDFAL---SLNASYEVDLAGRVQRTVEGAKASAEQSAADLQNTRLLLSADVASSY 187
               +  F L    L A +E+DL GRV+R VE A A+ E +  D +   L L ++ A +Y
Sbjct: 126 GKAGKEAFNLWQGDLVAGWELDLWGRVRRQVEAADATVEVAENDRRGVLLALLSETAGNY 185

Query: 188 FNLRSTDIELDVVTRSIALQRRALELVTARHDLGAVSGLDVAQQQSLLETTLTQVDVLRK 247
             LR+    LDV   ++ + R +L+L   R   G  + LDVAQ  + + +  +++  L  
Sbjct: 186 IQLRAVQHTLDVTQDNLRVARHSLKLSQDRQAEGVATRLDVAQASAQVASIESRLPSLEA 245

Query: 248 QRSQYEHALATLTGTPAPSFSLPVDLREIRPPA----VPLGVPSEILQRRPDVASAERAM 303
           QR    +AL+ L   P  S    + L+    PA      +G+PSE+ +RRPD+  AE  +
Sbjct: 246 QRDDLINALSLLAAEPPRSLQAEL-LQGGELPAPQQKFAIGLPSELAERRPDIRQAEARL 304

Query: 304 AAANAQIGVATAAFYPSIFISPTVGVDSRTIETLFNGPSLLWSVGVSATQVLFDGGRIRA 363
            AA A IGVA A FYPSI +S +VG  +  +       S  ++ G   +  +F+GGR++ 
Sbjct: 305 HAATASIGVAKADFYPSIRLSGSVGFQALQLSDFGGWDSRRFAFGPQMSLPIFEGGRLKG 364

Query: 364 NVDFAKAGYDVTVGNYRRTVLTAMQEVEDGITGLSALDSATAQAQAAVTAARRVLDMATS 423
            ++  +A       NYR+ VL A  E++D +   +A          AV   R  L+ A  
Sbjct: 365 TLELREAQQQEAALNYRKVVLGAWHEIDDVLRLYNASQLRRDHLAEAVRQNRIALETAQR 424

Query: 424 RYEGGASTYLDVITAQQSLLTVERQAAQLRGQRLLTAVFLVKALGGDW 471
           +Y  GA  +L+V+T Q +LL  E Q            V L KALGG W
Sbjct: 425 QYVEGAVDFLNVLTVQGALLASEEQWIDSSAAVSQALVGLYKALGGGW 472