Pairwise Alignments

Query, 415 a.a., RND efflux system, membrane fusion protein from Variovorax sp. SCN45

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  125 bits (315), Expect = 2e-33
 Identities = 99/327 (30%), Positives = 161/327 (49%), Gaps = 15/327 (4%)

Query: 92  GTLQGFVQSPISARASGYLKRWTKDIGSRVEKGELLAEIETPEIDQQLSQAVAARAQAAS 151
           GT+       + +R +G L +     G RV+ G+LLAEI+       L QA    AQ  +
Sbjct: 85  GTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQNQA 144

Query: 152 GLELARSTADRWEALRKKDVVSQQELDERRSAVAQATSNVAAADANVQRLKQTEGFKRVV 211
            L+ A+    R++ L  +D +++Q LD   + VAQ    V    A V   +    F ++ 
Sbjct: 145 QLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQIR 204

Query: 212 APFAGVITRRNVDVGDLIDAGSGGGAGRALFLLAQTDPLRVYINVPQAYAQLV----KAG 267
           AP +G +  R +D+G+L+ A        AL ++ QT+P+ V   +P+     V    ++G
Sbjct: 205 APISGRVGLRQLDLGNLVAAND----TTALVVITQTEPINVAFTLPETELSTVLERYRSG 260

Query: 268 QPVVVTQAELRGQT---FKGQVARTAGSIDTTTRMMQVEVSLPNSDGALLPGAYVQVSLP 324
             + V +A  RG +     G +      IDTTT  ++ +    N D AL P  +V V L 
Sbjct: 261 ASLPV-EAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFVNVRLL 319

Query: 325 L-AASRTLSVPSNALLFRAEGTRIAVVDPQGRVNLRAVTLGRNYGENVEVIDGLEHTDRM 383
                + +  P+ A+ F  +GT   VV+ Q  VN+R + +G + GEN  ++DGL+  DR+
Sbjct: 320 ADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGENSVILDGLKAGDRL 379

Query: 384 VLNPSDSLAEGDVVAVAPETPPAKAPT 410
           VL  +D L EG  V V  ++  ++ PT
Sbjct: 380 VLEGTDRLREGTKVEVVEDS--SQVPT 404