Pairwise Alignments

Query, 1073 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1041 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

 Score =  381 bits (979), Expect = e-109
 Identities = 290/1083 (26%), Positives = 515/1083 (47%), Gaps = 64/1083 (5%)

Query: 1    MVQLALRRPYTFIVMAMLIVLATPFVLA--RMATDIFPEINIPVVSVIWNYTGLPAQEMG 58
            +V  +LR  Y  +V+    VL    V A   +  D FP++    V++     GL A+++ 
Sbjct: 5    LVDASLR--YKVLVLVFFAVLVGLGVQAFRNVPVDAFPDVTPVQVNIYTESPGLAAEDVE 62

Query: 59   QRISGQVERGLTTTVSDIEHIESQSLAGVSIIKVFFQPTANIEMAISQVVASMQAQVRQL 118
            + ++  +E G    +  +E + S SL G+S + V+F+   +I  A   V   +Q    +L
Sbjct: 63   KLLTTPIE-GAMAGLPGVEEVRSVSLFGLSYVGVYFKDDVDIYFARRLVGEKLQEAKGRL 121

Query: 119  PPGITPPLVIKYSASSVPVIQLALSSPTRSENSLFDATVNQLRPQLI--TVPGAAIPFPY 176
            P G   P++   S+    V    + S  +  +++   T++    +LI  T PG      +
Sbjct: 122  PQGYGEPVLGPNSSGLGQVFWYTVESEDKKMSTMDLRTLHDWTVRLILRTAPGVDDIVSW 181

Query: 177  GGKNRLISVDLDTQALQARGLSPADVVNAVNTQNLILPSGTAKFGATEYNVKMNGSPDAI 236
            GG+ +   V +D + L    +S  +V+  +   N  +   +   GA ++ V+  G     
Sbjct: 182  GGEQKQFQVQIDPRKLIQYSVSFKEVMERLTANNKQVGGQSINLGAEQFLVRGLGLVGTT 241

Query: 237  AGLNDLPIRTVNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVS 296
              +  + I   NGA  Y+R+VA V++  +P+   V +DG   VL   L     +  ++V 
Sbjct: 242  KDIEQIVIAERNGAPVYVRNVAQVKEAPAPRFGAVTRDGKEAVLGIALARVNENAKNVVD 301

Query: 297  NIRAMLPIAAQTMPEDIKITPLFDQSVFVKAAVKGVVFEAILAAALTAAMVLLFLGNWRS 356
             ++A L +A   +P+ + + P++D++  VK A+       +  A L A ++ LFLG +RS
Sbjct: 302  AVKAKLAVAQAALPKGVTLQPVYDRTELVKKALNTAESSLVEGAILVAVILFLFLGEFRS 361

Query: 357  TLIIGLTIPLSILASILVLYSLGETLNLMTLGGLALSVGILVDQAIVTIENIERHL---- 412
             +++ +T+P+++L + +++   G + NLM+L GLA+  G++VD A+V +EN  R L    
Sbjct: 362  AIVVVITLPMAMLIAFILMQQFGVSANLMSLAGLAIGTGMMVDGAVVMVENAFRLLAHAK 421

Query: 413  HMGTPLKDA--IEVGAGEIGSAAFVSTLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMI 470
              G P++    I   A E+ +    + L I +VF+P+F L+G+   LF P+A  + FAM 
Sbjct: 422  ESGKPIQKTHLILEAAREVVNPIAFAILIIIVVFLPLFSLTGLEGKLFKPMAYTITFAMA 481

Query: 471  ASYLLSRTLVPTLVMLLMGGSHGPQQQQPAEGTRQSALQRLYRAFDRRFERVRRAYTLVL 530
             S LLS TLVP L  +++     P++++     R                R +R Y  +L
Sbjct: 482  GSLLLSLTLVPVLAAMIL----KPKEEKDTFLVR----------------RAKRIYLPLL 521

Query: 531  SAVLSRRAGFIGLFLGFCLLSCLLYPVLGRDFFPTVDAGQIRLHLRAPTGTRIEETARLT 590
               L R+   +G  +   L S  L+P LG++F P +  G I+  +     T ++E+ R++
Sbjct: 522  DWALERKRLVVGSAIVLLLASLALFPFLGKEFMPQLQEGTIQFRVTGIPSTSLDESIRVS 581

Query: 591  DQVEAAIRELVPPDQLETILDNLGVPNSG--INLSYSNAGTIGTFDGELLLSLKEGHKPT 648
            ++V AA+R+  P  Q+ ++L  +G    G   +++Y           EL L  K   +  
Sbjct: 582  NEVSAALRKQFP--QVRSVLATIGRAEGGETTDVNYM----------ELNLDTKPAEEWP 629

Query: 649  E-----QHVSLLRAELPKRFPGIEF-FFQPADIVTQILNFGLPAAIDVQFSGNDMAGNAA 702
            E     +  S ++  L K  P + F   QP     + L  G+ A + ++  G D+A    
Sbjct: 630  EKISYGKLASDMQEALEKVVPTVVFGATQPIQSRVEELISGVRATLALKLYGEDLATLDR 689

Query: 703  RAAELTKAIRQIPGAVDAHVHQRLDGPALSLQMDRTRLQQYGLTASNVGQNVLIALSGSS 762
               ++   + +IPG  D         P L ++++R    +YG+ A  + + V   + GS+
Sbjct: 690  LTGKIQGVLGKIPGIADLSAEANKGKPQLIIKVNRDAAARYGINADEILEVVQSGIGGSA 749

Query: 763  QTAPAFWLNPANGVVYSIAVQTPQYTVDSLDSLLNIPVGASGGQGGTGAQQLLGNLVSTQ 822
             +             + IAV+       S  ++ +IP+   G     GA      + S +
Sbjct: 750  VSTLIDGTKR-----FEIAVRLSDEFRVSPAAIASIPIRTGG-----GALVPFSQVASIE 799

Query: 823  ADRQPAVMSRYNIAPVIDVYVSVQGTDLASVASKVQKLVDEMRPKLSRGSRVDIRGQVQT 882
             D   + + R ++     + + V+G D+ S   +    + + + +L  G  ++  G  + 
Sbjct: 800  LDEGYSFIRRESLQRYSVLQMDVKGRDVDSFVKEADTQL-KAQVELPTGYWIEWGGSFEN 858

Query: 883  MQSSFIGLGVGLAMAIVLVYLLIVVTFQSWLDAAIIITALPAALAGIAWMLFITGTTLSV 942
             Q +   LGV + + I L+++L+   F S   A +II  +P A+ G    LF++G  LSV
Sbjct: 859  QQRAMARLGVIVPLTIGLIFILLYTAFNSVRHATLIIANVPFAIIGGIVGLFVSGQYLSV 918

Query: 943  PALTGAIMTMGVATANSILLVSFARERLQAGIPPLSAALEAGATRIRPVLMTALAMIIGM 1002
            P+  G I   GVA  N I++V+F  +  + G+P   A  +  A R+RPVLMTA   I+G+
Sbjct: 919  PSAIGFIAVFGVAMLNGIVMVTFLNDLRRQGLPIREAVQQGAALRLRPVLMTASVAILGL 978

Query: 1003 IPMALGLGEGAEQNAPLGRAVIGGLVFATVSTLFFVPAVFAGVHSRLARRRAAREASQQH 1062
            IPM L  G GAE   PL   V+GGL  +T  TL  +P ++     R  RR+A  E   + 
Sbjct: 979  IPMLLSTGVGAETQRPLATVVVGGLFTSTALTLLILPLMYEWAEQRAERRKAKTEEILEG 1038

Query: 1063 QPP 1065
            + P
Sbjct: 1039 ETP 1041