Pairwise Alignments

Query, 1073 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1033 a.a., CusA/CzcA family heavy metal efflux RND transporter from Magnetospirillum magneticum AMB-1

 Score =  337 bits (865), Expect = 2e-96
 Identities = 284/1055 (26%), Positives = 485/1055 (45%), Gaps = 58/1055 (5%)

Query: 1    MVQLALRRPYTFIVMAMLIVLATPFVLARMATDIFPEINIPVVSVIWNYTGLPAQEMGQR 60
            ++ L+LR     +  A+ + +    VLAR+  DIFP++N P V+++    GL  +E    
Sbjct: 5    IIALSLRHRLFVLAAALALTVYGSLVLARLPIDIFPDLNRPTVTIMTEALGLAPEESESL 64

Query: 61   ISGQVERGLTTTVSDIEHIESQSLAGVSIIKVFFQPTANIEMAISQVVASMQAQVRQLPP 120
            ++  +E  +      +  + S S  G+SI+ V F    +I      V   + +    LP 
Sbjct: 65   VTCHIETAMNGAPG-VVRVRSNSGVGLSIVFVEFDWGTDIYRNRQLVAERLSSARDLLPA 123

Query: 121  GITPPL-VIKYSASSVPVIQLALSSPTRSENSLFDATVNQLRPQLITVPGAAIPFPYGGK 179
            GI P +  +      + ++ +   +   S   L       LRP+L+++PG A   P GG+
Sbjct: 124  GINPVMGPVSSIMGEIMLVGVRSKAGATSPMELRSLADWSLRPRLLSIPGIAQVIPMGGE 183

Query: 180  NRLISVDLDTQALQARGLSPADVVNAVNTQNLILPSGTAKFGATEYNVKMNGSPDAIAGL 239
             R I V +    + A GL  ADV  A+         G  +  + E+ ++  G    +  L
Sbjct: 184  VRQIQVLVSPSRMSALGLGYADVEKALAGFARNTTGGFLEQRSAEFLIRNMGQTTDLNDL 243

Query: 240  NDLPIRTVNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVSNIR 299
             +  +   N A   +  VA VR+G   +      DG   V+L+V K  GA T+ +   + 
Sbjct: 244  RNTVVAWRNNAPVTVDQVAEVRNGAGIRRGDAAIDGQPAVILAVSKQPGADTVTLTRKVE 303

Query: 300  AMLPIAAQTMPEDIKITP-LFDQSVFVKAAVKGVVFEAILAAALTAAMVLLFLGNWRSTL 358
            A L    +T+P DI+    LF Q+ F+  AV  V       A L A ++  FL N R+T+
Sbjct: 304  AALAEIGRTLPADIEADRVLFRQADFISRAVANVAEALRDGAVLVAIVLFAFLMNMRTTV 363

Query: 359  IIGLTIPLSILASILVLYSLGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHMGT-- 416
            I    IPLS++ + LV +++  ++N MTLGGLA+++G LVD A+V +ENI R L      
Sbjct: 364  ISLTAIPLSMVVAALVFHAMNLSINTMTLGGLAVAIGELVDDAVVDVENILRRLRENAAT 423

Query: 417  ----PLKDAIEVGAGEIGSAAFVSTLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMIAS 472
                P+ + +   + E+ ++   +T+ + + F+P+F LSG+   LF PL  A V +++AS
Sbjct: 424  AQPRPVLEVVRSASSEVRNSIVYATMVVVLAFLPLFALSGIEGRLFAPLGIAYVVSILAS 483

Query: 473  YLLSRTLVPTLVMLLMGGSHGPQQQQPAEGTRQSALQRLYRAFDRRFERVRRAYTLVLSA 532
              +S T+ P L +LL+     P+ +    G   SAL R  +A+DR          ++L  
Sbjct: 484  LAVSLTVTPALSLLLL-----PRARVMGHG--DSALVRRLKAWDR----------ILLER 526

Query: 533  VLSRRAGFIGLFLGFCLLSCLLYPVLGRDFFPTVDAGQIRLHLRAPTGTRIEETARLTDQ 592
              +     I   L   +L+    P LGR F P+ + G + + +  P GT + E+ R+   
Sbjct: 527  SFANPKAVILPALALMILAAASVPFLGRTFLPSFNEGTVTVTVVLPPGTSLSESNRIGTI 586

Query: 593  VEAAIRELVPPDQLETILDNLGVPNSGINLSYSNAGTIGTFDGELLLSLKEGHKPTEQHV 652
             E  IR++  P+   T              +  +    G    E+ + L    +P +  +
Sbjct: 587  AETLIRQV--PEAAST--------GRRTGRAELDEHAEGVHYSEIDVDLHPSQRPRDAIL 636

Query: 653  SLLRAELPKRFPGIEF-FFQPADIVTQILNFGLPAAIDVQFSGNDMAGNAARAAELTKAI 711
              LRA L  + PGI     QP       L  G+ A I V+  G+D+    + AAE    +
Sbjct: 637  GDLRARL-AQIPGININIGQPISHRLDHLLSGVRAEIAVKIFGDDLDTLRSLAAEARTRM 695

Query: 712  RQIPGAVDAHVHQRLDGPALSLQMDRTRLQQYGLTASNVGQNVLIALSGS--SQTAPAFW 769
            + + G  D  V + +  P + +++DR   ++YGL    + + +  AL G   SQ      
Sbjct: 696  QGVRGIADLQVEKLVLIPQVQIRLDRAEARKYGLGLGQLTETLEAALQGKVVSQVRDG-- 753

Query: 770  LNPANGVVYSIAVQTPQYTVDSLDSLLNIPVGASGGQGGTGAQQLLGNLVSTQADRQPAV 829
                  +V  +A      T D    L++ P G            L+  +V TQ    P +
Sbjct: 754  -ERTTNLVLRLAEDWRAQTSDFRQILVDTPAGKV-------PLSLVAEVVETQG---PNL 802

Query: 830  MSRYNIAPVIDVYVSVQGTDLASVASKVQKLVDEMRPKLSRGSRVDIRGQVQTMQSSFIG 889
            ++R N+   + V+ + QG DL ++  ++Q  +  M   L  G  +   GQ Q+ Q +   
Sbjct: 803  INRDNLRRRVVVFANSQGRDLGAIMEELQAELGGM--TLPPGYAIAYEGQFQSRQEATRL 860

Query: 890  LGVGLAMAIVLVYLLIVVTFQSWLDAAIIITALPAALAGIAWMLFITGTTLSVPALTGAI 949
            +G+   +++  ++ L+   F+S L A +I+  +P AL G    L+++G  LSV  + G +
Sbjct: 861  IGLLALVSLGAIFALLHAHFRSGLLALVIMANIPMALVGSVGALWLSGLPLSVAGMVGFV 920

Query: 950  MTMGVATANSILLVSFARERLQAGIPPLSAA--LEAGATRIRPVLMTALAMIIGMIPMAL 1007
               G+A+ N I+ ++     ++        A  L     R+ PVLMTAL   + ++P+ L
Sbjct: 921  TLAGIASRNGIMKITHYLHLMRHEGEDFGPAMILRGSLERLTPVLMTALVAALALLPLVL 980

Query: 1008 GLGE-GAEQNAPLGRAVIGGLVFATVSTLFFVPAV 1041
              GE G E   P+   + GGL+ +T+      PAV
Sbjct: 981  AGGEPGKEILHPVAVVIFGGLMSSTLLDTLVTPAV 1015



 Score = 37.4 bits (85), Expect = 6e-06
 Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 7/159 (4%)

Query: 337  ILAAALTAAMVLLFLGNWRS---TLIIGLTIPLSILASILVLYSLGETLNLMTLGGLALS 393
            +LA     A+  L   ++RS    L+I   IP++++ S+  L+  G  L++  + G    
Sbjct: 863  LLALVSLGAIFALLHAHFRSGLLALVIMANIPMALVGSVGALWLSGLPLSVAGMVGFVTL 922

Query: 394  VGILVDQAIVTIENIERHL--HMGTPLKDAIEV-GAGEIGSAAFVSTLCICIVFVPMFFL 450
             GI     I+ I +   HL  H G     A+ + G+ E  +   ++ L   +  +P+   
Sbjct: 923  AGIASRNGIMKITHY-LHLMRHEGEDFGPAMILRGSLERLTPVLMTALVAALALLPLVLA 981

Query: 451  SGVARFLFVPLAEAVVFAMIASYLLSRTLVPTLVMLLMG 489
             G      +     V+F  + S  L  TLV   V+LL+G
Sbjct: 982  GGEPGKEILHPVAVVIFGGLMSSTLLDTLVTPAVVLLIG 1020