Pairwise Alignments

Query, 1073 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1051 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  365 bits (937), Expect = e-105
 Identities = 271/1058 (25%), Positives = 493/1058 (46%), Gaps = 43/1058 (4%)

Query: 1    MVQLALRRPYTFIVMAMLIVLATPFVLARMATDIFPEINIPVVSVIWNYTGLPAQEMGQR 60
            + +++++R    +V+  ++ L   F   +M+ ++ P+ +  VV+V   Y G    E+   
Sbjct: 3    ITKISIKRSTIVVVLFTILTLLGIFSYTQMSYELLPKFSPNVVTVSTVYPGAAPSEVENS 62

Query: 61   ISGQVERGLTTTVSDIEHIESQSLAGVSIIKVFFQPTANIEMAISQVVASMQAQVRQLPP 120
            ++ ++E  L + +  I+ ++S SL   SII +      ++++ +      + A +  LP 
Sbjct: 63   VTRKLEDALAS-LEGIDVMKSTSLESFSIITIELDDDVDVDLILQDAQRDIDAVLGDLPE 121

Query: 121  GITPPLVIKYSASSVPVIQLALSSPTRSENSLFDATVNQLRPQLITVPGAAIPFPYGGKN 180
             + PP + K+S   +P++Q+   S   +    +D    +++P +  + G A     GG  
Sbjct: 122  DVDPPSLGKFSLDDMPIMQMGAYS-NLTATDFYDLMDQRIQPMISQIDGVAQVNLLGGAE 180

Query: 181  RLISVDLDTQALQARGLSPADVVNAVNTQNLILPSGTAKFGATEYNVKMNGSPDAIAGLN 240
            R I V+LD   L   G+SP  V  A+   NL  P+G  K    +  +++ G    +  + 
Sbjct: 181  REIKVNLDQNKLNTYGISPLQVNQAIAQANLDFPTGKLKSDKEQILIRLAGKFTQVDEIG 240

Query: 241  DLPIRTVNGATTYLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVSNI-R 299
            +L +   +G+   ++DVA V D    +  + R +G   + +S+ K   A+ +D+   + +
Sbjct: 241  ELIVSYADGSPIKIKDVAEVVDSNKDEEILSRLNGNSAIGISIQKQSDANAVDVAERVNK 300

Query: 300  AMLPIAAQTMPEDIKITPLFDQSVFVKAAVKGVVFEAILAAALTAAMVLLFLGNWRSTLI 359
            A+  +      +D++     D S F   A   V+ + I+A  L A ++LLFL ++R+ +I
Sbjct: 301  ALAQLETTYAGDDLRFEISQDSSEFTLEAANAVIHDLIIAVVLVAVIMLLFLHSFRNAVI 360

Query: 360  IGLTIPLSILASILVLYSLGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHMGTPLK 419
            + + +P+SI+A+  V+Y  G TLNLM+L  L+L VGILVD AIV IENI RH+  G    
Sbjct: 361  VMIAVPMSIIATFTVMYLAGFTLNLMSLLALSLVVGILVDDAIVVIENIYRHMEKGKSAI 420

Query: 420  DAIEVGAGEIGSAAFVSTLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMIASYLLSRTL 479
             A   G  EIG      TL I +VFVP+    G+   +    +  V  A + S L++ TL
Sbjct: 421  QASYDGIREIGGTVTSITLVIVVVFVPLSMTGGLISGILTQFSITVAVATMMSLLVAFTL 480

Query: 480  VPTLVMLLMGGSHGPQQQQPAEGTRQSALQRLYRAFDRRFERVRRAYTLVLS-----AVL 534
            +P L        H   +         S   ++   F+   +      T +L       ++
Sbjct: 481  IPLLTSRFSKLEHLDPK---------SIFGKIVNGFEGFLDAFVAWLTGILKWSFNHKII 531

Query: 535  SRRAGFIGLFLGFCLLSCLLYPVLGRDFFPTVDAGQIRLHLRAPTGTRIEETARLTDQVE 594
            +  A F+     F L+    Y  +G +F    D G+  + L  P    +EET   T + E
Sbjct: 532  TLVATFVLFVSSFMLVG---YGFIGSEFVSQGDKGEFIMRLELPKSATLEETNFTTREAE 588

Query: 595  AAI-RELVPPDQLETILDNLGVPNSGINLSYSNAGTIGTFDGELLLSLKEGHKPTEQHVS 653
              + +  +      T+    G  +   +  Y++  T+   DG      K+ +    +   
Sbjct: 589  NFLTKNPMVTSVFTTVGQTTGSMSGSQSTPYASEITVKMVDG------KKRNLTAPEFAR 642

Query: 654  LLRAELPKRFPGIEFFFQPADIVTQILNFGLPAAIDVQFSGNDMAGNAARAAELTKAIRQ 713
             +   L +   G EF   P  I T   N    A I +  SG D+    + +  +   + +
Sbjct: 643  EMEIALEENIVGAEFTAVPIGI-TGTAN---DAPIQIVLSGPDLDTLKSFSQRVLAEVEK 698

Query: 714  IPGAVDAHVHQRLDGPALSLQMDRTRLQQYGLTASNVGQNVLIALSGSSQTAPAFWLNPA 773
            +PG   A        P + +++DR ++   GL  + VG  + +A +G++ T         
Sbjct: 699  VPGTRKAQTSLEDGNPEIRVEVDRAKMSDLGLDMAMVGGTMQVAFNGNTDTKYR-----D 753

Query: 774  NGVVYSIAVQTPQYTVDSLDSLLNIPVGASGGQGGTGAQQLLGNLVSTQADRQPAVMSRY 833
                Y I ++  ++   S+  + N+    + GQ       LL           P+ ++R 
Sbjct: 754  GDYEYDINIRMDEFDRKSVADIENLAFVNTKGQ-----TVLLKQFAKAIPSEGPSELNRQ 808

Query: 834  NIAPVIDVYVSVQGTDLASVASKVQKLVDEMRPKLSRGSRVDIRGQVQTMQSSFIGLGVG 893
            +    + V   V G    +V +++Q+ + ++   L +   V   G ++  +  F  LGV 
Sbjct: 809  DRITSVTVQSQVSGRPSGTVGTEIQERIAKL--DLPKEVTVAYEGDMKMQEEGFGSLGVA 866

Query: 894  LAMAIVLVYLLIVVTFQSWLDAAIIITALPAALAGIAWMLFITGTTLSVPALTGAIMTMG 953
            L  +I+L+YL++V  + +++   +++ +LP A+ G    L ++G+ LS+ ++ G IM MG
Sbjct: 867  LLASILLIYLIMVALYDNYVFPLVVMFSLPLAVIGALLALAMSGSALSIFSILGLIMLMG 926

Query: 954  VATANSILLVSFARERLQAGIPPLSAALEAGATRIRPVLMTALAMIIGMIPMALGLGEGA 1013
            +   N+ILLV F  +   AG+   +A ++A   R RP+LMT LAM+ GM+P+AL  G GA
Sbjct: 927  LVAKNAILLVDFTNQLKAAGLEVKAALVKAVEIRFRPILMTTLAMVFGMLPIALASGAGA 986

Query: 1014 EQNAPLGRAVIGGLVFATVSTLFFVPAVFAGVHSRLAR 1051
            E    L  A+IGGL+ +   T+  VP ++      LAR
Sbjct: 987  EWKNGLAWALIGGLISSMFLTMVVVPVIYYIFDRILAR 1024