Pairwise Alignments

Query, 1073 a.a., CzcABC family efflux RND transporter, transmembrane protein from Variovorax sp. SCN45

Subject, 1029 a.a., Cation/multidrug efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  572 bits (1475), Expect = e-167
 Identities = 347/1055 (32%), Positives = 563/1055 (53%), Gaps = 33/1055 (3%)

Query: 13   IVMAMLIVLATPFVLARMATDIFPEINIPVVSVIWNYTGLPAQEMGQRISGQVERGLTTT 72
            +V  + IV      +  M  DIFP++  P + V   Y GL   ++   ++   E      
Sbjct: 1    MVALLAIVFFAVLSIRNMPVDIFPKLGTPTIYVAQTYGGLAPNQIEGFMTSYYEYHFLY- 59

Query: 73   VSDIEHIESQSLAGVSIIKVFFQPTANIEMAISQVVASMQAQVRQLPPGITPPLVIKYSA 132
            ++ I+ +ES+++ GVS++K+ F    ++  A+++VVA +      +PPG  PP + ++  
Sbjct: 60   INGIKEVESKTIQGVSLMKLTFHEGTDMSQALAEVVAQVNRSRAFMPPGTVPPFITRFDG 119

Query: 133  SSVPVIQLALSSPTRSENSLFDATVNQLRPQLITVPGAAIPFPYGGKNRLISVDLDTQAL 192
               PV QL  SS +RS   + D  + ++RP+  ++PG + P P+GG  R + +  D   L
Sbjct: 120  GGAPVGQLVFSSESRSLGEIQDLALFKVRPKFASIPGVSAPPPFGGNQRTVLIKADPSKL 179

Query: 193  QARGLSPADVVNAVNTQNLILPSGTAKFGATEYNVKMNGSPDAIAGLNDLPIRTVNGATT 252
            ++  +SP ++V A+   N I PSG  +       V  N     I  L ++P++  +G   
Sbjct: 180  RSYNISPDELVMAIAKGNTISPSGNIRTADKLLIVNQNTVVSDIQELANIPLKKGSGPAV 239

Query: 253  YLRDVAYVRDGFSPQTNVVRQDGVRGVLLSVLKNGGASTLDIVSNIRAMLPIAAQTMPED 312
            Y+RDVA V++G    +     +G R V + V K   AST D+V  I+A LP     +P+D
Sbjct: 240  YVRDVAEVQNGSDVASGYALINGSRSVYIPVTKRASASTWDVVRRIKASLPEMQAAVPDD 299

Query: 313  IKITPLFDQSVFVKAAVKGVVFEAILAAALTAAMVLLFLGNWRSTLIIGLTIPLSILASI 372
            IK++  FDQS +V  ++K + FE IL A LT  MVLLFLG+ RS LI+ LTIPL+IL++I
Sbjct: 300  IKVSYEFDQSGYVINSLKTLSFEGILGAVLTGLMVLLFLGDRRSALIVILTIPLAILSAI 359

Query: 373  LVLYSLGETLNLMTLGGLALSVGILVDQAIVTIENIERHLHMGTPLKDAIEVGAGEIGSA 432
            + LY  G+T+N+MTLGGLAL++GILVD++ VTIENI RH  MG     AI     EI   
Sbjct: 360  VCLYLTGQTINIMTLGGLALAIGILVDESTVTIENIHRHQEMGKTKTRAILDACKEIALP 419

Query: 433  AFVSTLCICIVFVPMFFLSGVARFLFVPLAEAVVFAMIASYLLSRTLVPTLVMLLMGGSH 492
              +  + I  VFVP FF+SG  R +F+PL  AV FAMIAS+LLS+T+VP L    +   H
Sbjct: 420  KLLILISILAVFVPSFFMSGTPRAMFLPLTLAVGFAMIASFLLSQTMVPILSNWFL-KDH 478

Query: 493  GPQQQQPAEGTRQSALQRLYRAFDRRFERVRRAYTLVLSAVLSRRAGFIGLFLGFCL-LS 551
             PQ++                  D +F R R   T     + ++    IG++L   + + 
Sbjct: 479  VPQKE------------------DGKFHRFRNRVTGYTKGITNKGGWAIGIYLAVIVAML 520

Query: 552  CLLYPVLGRDFFPTVDAGQIRLHLRAPTGTRIEETARLTDQVEAAIRELVPPDQLETILD 611
              L+   G + FP V++GQ+++ LR P GTRIE T   T Q    + E+V  + +E    
Sbjct: 521  ASLWQFTGTEIFPKVNSGQLQVRLRMPDGTRIENTEEKTKQFLEVVNEVVGKENVEITSA 580

Query: 612  NLGV--PNSGINLSYSNAGTIGTFDGELLLSLKEGHKPTEQHVSLLRAELPKRFPGIEFF 669
             +G+  P+  +N  +   G  G  +  + + LKE  +  +     LR  + +  P +   
Sbjct: 581  FVGIQPPSYPVNTIFLWTG--GPHEAVVKIKLKETGQDLDVLKETLRKRIAEAIPDMRLS 638

Query: 670  FQPADIVTQILNFGLPAAIDVQFSGNDMAGNAARAAELTKAIRQIPGAVDAHVHQRLDGP 729
            F+PAD+V Q+++ G   ++++   G +++ +   A  +   I  +    D      L+ P
Sbjct: 639  FEPADLVDQVMSQGANTSVEIAVQGKNLSESRKFAEAIKDRIEGLSFMRDVQFGIPLNYP 698

Query: 730  ALSLQMDRTRLQQYGLTASNVGQNVLIALSGSSQTAPAFWLNPANGVVYSIAVQTPQYTV 789
            ++ L+ DR R  Q GLT  ++ ++V  + S S  T P +WL+  +G  Y + V+ PQY +
Sbjct: 699  SIDLEYDRVRAGQLGLTIEDISRSVTASTSSSRFTQPNYWLDAGSGHAYQVQVEFPQYLI 758

Query: 790  DSLDSLLNIPVGASGGQGGTGAQQLLGNLVSTQADRQPAVMSRYNIAPVIDVYVSVQGTD 849
            D  D +  +P+ +  G+         G++   +         R N    I +  ++   D
Sbjct: 759  DQPDDIERVPLKSENGK-----TVYAGDVGKWEPATMIGEYDRLNQQRFITITGNLHNKD 813

Query: 850  LASVASKVQKLVDEMRPKLSRGSRVDIRGQVQTMQSSFIGLGVGLAMAIVLVYLLIVVTF 909
            L      ++  +  M      G  V  RG  +T+  +F  L  GL +A+ +++LL+   F
Sbjct: 814  LGGAIKTLRNELKAMGDP-PAGMSVKFRGLAETLTQTFNELSTGLLLAVAVIFLLLAANF 872

Query: 910  QSWLDAAIIITALPAALAGIAWMLFITGTTLSVPALTGAIMTMGVATANSILLVSFARER 969
            QS+  +  +++ +PA +AG   +++I+G+TL++ +  G+IM +GVA AN+IL V+ A + 
Sbjct: 873  QSFRLSFAVLSTVPAVIAGSFLLIWISGSTLNIQSFMGSIMAIGVAVANAILFVTIAEQY 932

Query: 970  LQAGIPPLSAALEAGATRIRPVLMTALAMIIGMIPMALGLGEGAEQNAPLGRAVIGGLVF 1029
             +      +  LE    R+RP+LMT +AMI GM PMALGLGEG EQ APLG AVIGGL+F
Sbjct: 933  RKD--QRQNPHLEGIKDRLRPILMTTIAMIAGMTPMALGLGEGGEQTAPLGIAVIGGLLF 990

Query: 1030 ATVSTLFFVPAVFAGVHSRLARRRAAREASQQHQP 1064
            +  +T+F +PA++  +  R   +  + +   +  P
Sbjct: 991  SVFATVFMLPAIYWQLIGRKHYKSISLDPDDEQSP 1025