Pairwise Alignments

Query, 321 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 81/319 (25%), Positives = 120/319 (37%), Gaps = 14/319 (4%)

Query: 9   STDAVPPAQRLDYWVGAVCEGFLEMDVTSPEAGRFGATLE--SAPLGPIVVNRVRGSAQD 66
           ST   P  +R   W  A+ + +  + +       F   L+  S P  P+ ++R+R S   
Sbjct: 6   STHGWPQPERQVRWAEAISDTYFPLSLEFAAGQPFDGHLQRWSTPSTPLSLSRLRSSQLG 65

Query: 67  VFRTRRAIAQSRHNYFYLLCKTDSAWVAV-QDGRSARLLPGDAVLVDSRRRYEFHLLQSA 125
             R++  I Q  H  FYL+     + V   QDG      PG  ++      Y FH     
Sbjct: 66  YSRSKAHIGQD-HEAFYLVTVPHGSEVHFEQDGHQISCSPGGFIVERGDAPYRFHYGTQN 124

Query: 126 DTLSLELPTAWVEQWIPDAGDQVARRIDGQSGWGGVLCGFLRQLSPEVAVQPPLSAGLLS 185
           D   L+LP   ++  +           D + G G +    L   +      PP +  LL 
Sbjct: 125 DLWVLKLPERALKANLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFDTSPPAARHLLL 184

Query: 186 DQLGGLLALATGQG---LASEPGTSRAALRRRVLDATRERHAEPGLTAASVARGLGISER 242
           +Q    L LA  Q    L SE          RV    ++   +P L+  ++A   G+S R
Sbjct: 185 EQASATLLLALQQDERVLGSEGSNLSTLHLTRVEQYVQQNLGDPELSPQTIAGACGLSLR 244

Query: 243 SLHRCLAGGASGGEGATTFASALAGFRMAVARRMLGDARFDRLGIAEIGFRVGLTDASHF 302
            LH+  A          T    +   R+    R L D     L I E+ FR G  D + F
Sbjct: 245 YLHKLFA------ITPYTLNEWVRLQRLEAVHRQLRDPHC-HLAIGELAFRWGFADQAQF 297

Query: 303 VRQCRAHLGATPGELRRRR 321
            R  R   G T  E+R  R
Sbjct: 298 TRAFRQQYGCTASEVRATR 316