Pairwise Alignments

Query, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  374 bits (959), Expect = e-108
 Identities = 214/561 (38%), Positives = 333/561 (59%), Gaps = 23/561 (4%)

Query: 1   MLAAITEPLMAALLKPLLDRGFTRGEMPLW-------------FVPAAVLLLFAVRGIAQ 47
           ++ A T+P++A +LK  +D G +  E  L+              VP  ++L+ A +G+  
Sbjct: 39  VIFASTQPMLAGILKYFVD-GLSNPEAVLFPNVPYLRDLQLLQAVPLLIILIAAWQGLGS 97

Query: 48  FISQYALSRIANEGMQKLRRVMFERLLGAELALFTRQSASALSNTVVYEVQTGAMLLVQA 107
           F+  Y L++++   +  LR  +F +LL      F   ++  L + + + V         A
Sbjct: 98  FLGNYFLAKVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDA 157

Query: 108 LLGLSRDGFTLIALLGYLVYLNWKLTLIVAFLVPSISWIMKVFSKRLYRLTQQGQQATDE 167
           +  + R+G T++ L  YL+++NW LTL++  ++P I+ ++ + SK+  + +++ Q A  +
Sbjct: 158 IKVVIREGLTVVFLFAYLLWMNWHLTLVMVAILPVIAVMVSIASKKFRKQSKKIQVAMGD 217

Query: 168 LAYVVEENVLAHRVVRLHGAEGAQGRRFEQLSQRLNRLAVKSTIAQAATTPLTQMMASLA 227
           + +V  E +  +RVVR  G E  + +RF Q SQ      ++ T   +  TP+ Q++   A
Sbjct: 218 VTHVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSA 277

Query: 228 LSVVVMIALWQSGKQGFTVGGFVAYITAMLMLIAPIRRLAEVAGPITRGLAALERGLVLI 287
           ++ ++ + L+  G    T G  VAYITA  +L  PIR+L+EV+  I +GLA  E     +
Sbjct: 278 MAALMFLVLFLRGDS--TAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQL 335

Query: 288 DEVAPESQGTFRIEHAEGRIELRNVQVSYRGDDEQRALDGVNLTIEPGQVVAFVGPSGSG 347
           DE      GT   E  EGR+E+RN+  +Y G  E+  L  ++   EPGQ++A VG SGSG
Sbjct: 336 DEAPEVDTGTVEKERVEGRLEVRNLSFTYPGT-EREVLSDISFVAEPGQMIALVGRSGSG 394

Query: 348 KTTLVNLLPRFVQPSSGQVLLDGHDTSEWELKSLRAQFAMVSQDVVMLNETLAANVALGS 407
           K+TL  L+PRF     GQ+LLDG +   + L++LR   + V+Q V + N+T+A N+A G 
Sbjct: 395 KSTLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGD 454

Query: 408 EIDRERVLQCIDAANLSSH----VENLPQGIDTVLGHNATQLSGGQRQRLAIARALYKNA 463
                R    I+AA   ++    V+ LP+G DT +G N   LSGGQRQRLAIARAL KNA
Sbjct: 455 LAGAPRA--DIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNA 512

Query: 464 PVLLLDEATSALDTESERLVQDALQRLMQNRTTLIVAHRLSTIQHADRIIVMEQGRIAEQ 523
           P+L+LDEATSALDTESER +Q AL  +MQ RTTL++AHRLSTI+ AD+I+VM+QGR+ E+
Sbjct: 513 PLLILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVER 572

Query: 524 GSHEQLMQLDGLYARLQTLAV 544
           G+H +L+  +G YARL  + +
Sbjct: 573 GTHTELLAANGHYARLHAMGL 593