Pairwise Alignments

Query, 555 a.a., Lipid A export permease/ATP-binding protein MsbA from Variovorax sp. SCN45

Subject, 582 a.a., lipid A ABC transporter ATP-binding protein/permease MsbA from Dickeya dianthicola ME23

 Score =  390 bits (1001), Expect = e-112
 Identities = 209/542 (38%), Positives = 332/542 (61%), Gaps = 4/542 (0%)

Query: 4   AITEPLMAALLKPLLDRGFTRGEMP-LWFVPAAVLLLFAVRGIAQFISQYALSRIANEGM 62
           A  + LM +LLKPLLD GF + +   L ++P A++ L  +RGI+ +IS Y ++ ++ + +
Sbjct: 38  AAGDTLMLSLLKPLLDDGFGKADRSVLVWMPLAIIGLMIMRGISSYISSYCVAWVSGKVV 97

Query: 63  QKLRRVMFERLLGAELALFTRQSASALSNTVVYEVQTGAMLLVQALLGLSRDGFTLIALL 122
             +RR +F  ++G  ++ F +QS   L + + Y+ +  A     AL+ + R+G ++I L 
Sbjct: 98  MNMRRRLFSHIMGMPVSFFDQQSTGTLLSRITYDSEQVAASSSNALVTVVREGASIIGLF 157

Query: 123 GYLVYLNWKLTLIVAFLVPSISWIMKVFSKRLYRLTQQGQQATDELAYVVEENVLAHRVV 182
             + + +W+L+LI+  + P +S+ M+V SKR   +++  Q    ++    E+ +  H+ V
Sbjct: 158 VLMFWYSWQLSLILVLIAPIVSYSMRVVSKRFRSISKSMQNTMGQVTTSAEQMLKGHKEV 217

Query: 183 RLHGAEGAQGRRFEQLSQRLNRLAVKSTIAQAATTPLTQMMASLALSVVVMIALWQSGKQ 242
            + G +  +  RF+ +S R+ +  +K   A + + P+ Q++ASLAL+ V+  A + S  +
Sbjct: 218 LIFGGQTVEVERFDAVSNRMRQQGMKMVSASSISDPVVQLIASLALAFVLYAASFPSVME 277

Query: 243 GFTVGGFVAYITAMLMLIAPIRRLAEVAGPITRGLAALERGLVLIDEVAPESQGTFRIEH 302
             T G      ++M  L+ P++ L  V     RG+AA +    ++D    +  GT  + H
Sbjct: 278 TLTAGTITVVFSSMFTLMRPLKSLTNVNAQFQRGMAACQTLFTILDMEQEKDTGTRVLAH 337

Query: 303 AEGRIELRNVQVSYRGDDEQRALDGVNLTIEPGQVVAFVGPSGSGKTTLVNLLPRFVQPS 362
           A+G IE R V  +Y G  E  AL  ++L I PG+ VA VG SGSGK+T+ NL+ RF    
Sbjct: 338 AKGNIEFRQVNFTYPG-KETLALKNISLHIPPGKTVALVGRSGSGKSTIANLITRFYDIQ 396

Query: 363 SGQVLLDGHDTSEWELKSLRAQFAMVSQDVVMLNETLAANV--ALGSEIDRERVLQCIDA 420
           +G++LLDGHD  ++ L SLR+Q A+VSQ+V + N+T+A N+  A G    RE + +    
Sbjct: 397 AGEILLDGHDLRDYTLSSLRSQVALVSQNVHLFNDTIANNIAYACGDRYSREDIERAAKM 456

Query: 421 ANLSSHVENLPQGIDTVLGHNATQLSGGQRQRLAIARALYKNAPVLLLDEATSALDTESE 480
           A+    +  L QG+DTV+G N   LSGGQRQR+AIARAL ++ P+L+LDEATSALDTESE
Sbjct: 457 AHAMDFIGRLEQGLDTVIGENGVLLSGGQRQRIAIARALLRDCPILVLDEATSALDTESE 516

Query: 481 RLVQDALQRLMQNRTTLIVAHRLSTIQHADRIIVMEQGRIAEQGSHEQLMQLDGLYARLQ 540
           R +Q AL  L +NRT L++AHRLSTI+ AD I+V+E G+I E+G H +L+  +G YA+L 
Sbjct: 517 RAIQAALDELQKNRTALVIAHRLSTIEKADEILVVEDGQIIERGQHSELLARNGAYAQLH 576

Query: 541 TL 542
            L
Sbjct: 577 KL 578