Pairwise Alignments

Query, 379 a.a., Chaperone protein DnaJ from Variovorax sp. SCN45

Subject, 319 a.a., Curved DNA-binding protein from Pseudomonas putida KT2440

 Score =  165 bits (417), Expect = 2e-45
 Identities = 122/357 (34%), Positives = 170/357 (47%), Gaps = 60/357 (16%)

Query: 5   RDYYETLGVPKNASEEEIKKAYRKLAMKHHPDRNHGDTAKDAEAKFKEVKEAYEMLSDGQ 64
           +DYY+ LGV   A E+ IK AYRKLA K+HPD +     +DAE KFKE  EAYE+L D Q
Sbjct: 4   KDYYKILGVEPTADEKAIKAAYRKLARKYHPDVSK---ERDAEEKFKEANEAYEVLGDAQ 60

Query: 65  KRAAYDQ---YGHAGVDPNMRGGPGAE---GFGGFAEA-FGDIFGDVFGGGGRGRTSSGR 117
           KRA +D+   YG     P  +  PG E   G GGF    F D F  +FGG   G      
Sbjct: 61  KRAEFDEIRKYGGQHGRP-FQAPPGWESRGGGGGFEGGDFSDFFSSIFGGRSAG------ 113

Query: 118 QVFRGSDLSYAMEITLEEAAEGKTTEIRIPTWDECDTCHGSGAKPGTKPITCTTCHGAGA 177
               G+    A +        G+  E+ +  + E +T                      +
Sbjct: 114 ----GNPFGGARQQQRSAGRRGQDVELELAVFLE-ETL---------------------S 147

Query: 178 VQMRQGFFSVQQTCPTCHGSGKIIPEPCTACHGQGKIKRNKTLEVKIRAGIDDGQRMRVT 237
            + +Q  F V QT                   GQ      KTL V+I AG+ DG+R+R+ 
Sbjct: 148 KESKQISFQVPQT----------------NAMGQRTGFTTKTLNVRIPAGVTDGERIRLK 191

Query: 238 GSGEPGVNGGPPGDLYIEIRLKKHDIFERDGDNLHCVVPVSMTTAALGGEINVPTLKGAA 297
           G G PG  GG  GDL++ IR+  H +F+ +G +L   VP++   AALG ++ VPTL G  
Sbjct: 192 GQGAPGSGGGANGDLFLTIRMAPHPLFDVEGHDLIITVPLAPWEAALGAKVAVPTLDGKI 251

Query: 298 AIDIPEGTQSGKQFRLRGKGIKGVNSSYPGDLYCHVRVETPVKLTEFQRKLLKDLDD 354
            + I   +QSG++ R+ GKG+        G+LY  ++V  P    E  R+L   L +
Sbjct: 252 NLTIRPDSQSGQRLRVPGKGLAN-KQGERGNLYAQLKVVMPPASDESARELWTKLSE 307