Pairwise Alignments

Query, 330 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

Subject, 339 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score =  132 bits (332), Expect = 1e-35
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 4/301 (1%)

Query: 20  LTASNVTTA---RTFRSAEVHAKDFPTNQAVKFMGDELSKATGGKDNIKIFADSSLGSEK 76
           L AS V      RT + A  +    P     +   D ++  + GK  +K+FA   LG + 
Sbjct: 21  LAASGVAAQVKERTLKFAFQNQTGHPQALGAQKFADLVAAKSDGKMKVKLFAGGVLGGDL 80

Query: 77  DTVEQVKIGALDMVRVSSASFHGIVPESVIPSLPFLFRDIEHFRKAMYGPTGDKVLAAFE 136
            TV  ++ G +++  +++      V E      PFLF D +       GP G K++A  E
Sbjct: 81  QTVSALQGGTIELTVLNAGILSAQVKEFAAYDFPFLFNDGKEADAVTDGPFGQKLMAKLE 140

Query: 137 KAGFIGLCMYESGARSVY-AKKPIKSVADMKGLKIRVQPSDLMVSLVSAAGASPTPMPIA 195
             G  GL  ++ G R++  +++PI    D+ GLKIRV  S + + + SA GA+ TP+P  
Sbjct: 141 DKGLYGLGYWDLGFRNLTNSRRPITRADDITGLKIRVIQSPIYIDVFSALGANATPLPFP 200

Query: 196 EVYTGLKTGLVDAAENNYPSYEEAKHFEAAPVYSETMHVMTPEVLVFSKKIWDTLTKEEQ 255
           E+Y  L+   VD  EN   +   +K  E     ++T H+  P+ L+ SKK WD+++ EE+
Sbjct: 201 ELYPALEQKAVDGQENPNTTILSSKFSEVQKYITQTRHIYNPQALLISKKTWDSMSAEEK 260

Query: 256 AAIRKAAKDSVPYYVKLWEPREKDAKAAVIKGGAKIVAASEIDRKGFVDVEKPVWDKFAT 315
             + +A+ ++  +           A  A+ K G  +   S  +        KPV DK+A 
Sbjct: 261 KILTQASNEATVFQRAASRGAADGALDALKKAGMTVSEISPEEMTKLRAKVKPVIDKYAA 320

Query: 316 T 316
           +
Sbjct: 321 S 321