Pairwise Alignments

Query, 264 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score =  106 bits (265), Expect = 4e-28
 Identities = 78/262 (29%), Positives = 131/262 (50%), Gaps = 8/262 (3%)

Query: 2   KLGTTFTRTCVALALVAGV-AQAAMADQLDDIKKAGKVRVAIAMGTPLFSFADANLQPTG 60
           K         +AL L AG+ +QA   +QL  I++ G + V +    P FSF D N + TG
Sbjct: 3   KFAKPLLNASLALLLGAGLLSQAFAGEQLKTIQEKGVINVGLEGTYPPFSFQDENGKLTG 62

Query: 61  SDVDTATALAKDLGVKLEIVSITNAARVPTLQAQRADLVIADLSITPEREKVVDFSVPYA 120
            +V+ +  LAK+LGVK +I        +  L+++R D+V+  ++I+ ER+K  DFS PY 
Sbjct: 63  FEVELSELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSEPYT 122

Query: 121 VIS----IIVGGPKSIKVTDYADLNGKRIGLTRATVNDTLTTQQAKGAEIVRYEDDATLI 176
           V      I+    + + +    DL GK++G+   T  +    +    A++  YEDD +  
Sbjct: 123 VSGIQALILKKKAEQLNIKGAQDLAGKKVGVGLGTNYEQWVKKDVPQADVRTYEDDPSKF 182

Query: 177 TSMVTGQIDLFSSTPSNLSEMVKQAPAKNLELK-FAQKDFDLGIALNKEQPKLKEWVNNW 235
             +  G+ID  +     L+ +     AK+ EL   A    + G+AL K +P+L   +N  
Sbjct: 183 ADLRNGRID--AILIDRLAALEYAQKAKDTELAGDAFSRLESGVALRKGEPELLAAINKA 240

Query: 236 VVTNQKNGKLNAIYKKYHGRDL 257
           +   + +G L  + +KY G D+
Sbjct: 241 IDKLKADGTLAKLSEKYFGADV 262