Pairwise Alignments

Query, 264 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 278 a.a., amino acid ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 99.0 bits (245), Expect = 1e-25
 Identities = 72/260 (27%), Positives = 130/260 (50%), Gaps = 9/260 (3%)

Query: 11  CVAL-ALVAGVAQA--AMADQLDDIKKAGKVRVAIAMGTPLFSFADANLQP-TGSDVDTA 66
           C+ L A V GVA A  AMADQLD I     +R A       F+  D   +   G DVD  
Sbjct: 5   CLTLTAAVLGVAAASPAMADQLDTITANKVLRCATFADVVPFAAPDPKTREMAGFDVDLC 64

Query: 67  TALAKDLGVKLEIVSITNAARVPTLQAQRADLVIADLSITPEREKVVDFSVPYAVISIIV 126
            A+AK+LGVK EI  ++  ARVP ++  R D+ +A+L+ T  R + + FS PY +   ++
Sbjct: 65  KAIAKELGVKAEIKPVSVEARVPEVKLGRVDITVANLAYTQSRAEQIQFSDPYYLAKEML 124

Query: 127 GGPKSIKVTDYADLNGKRIGLTRATVNDTLTTQQAKGAEIVRYEDDATLITSMVTGQIDL 186
             P        +D  G+R+  T+ + ++   + +   +E + ++D A+   ++  G+   
Sbjct: 125 IVPVEDAGKKKSDYEGQRVASTKGSTSE--MSIKLNKSEPLTFQDTASAYLAVQQGKARG 182

Query: 187 FSSTPSNLSEMVKQAPAKNLELKFAQKDF---DLGIALNKEQPKLKEWVNNWVVTNQKNG 243
             +     ++ VK++  K   ++  ++      +GI + K+ P L   +N  +     +G
Sbjct: 183 MVANTMTTTKFVKESKTKGKPMRMIEEPMLYQPIGIGMAKDNPALTAKINEILRKLDADG 242

Query: 244 KLNAIYKKYHGRDLPERITK 263
           ++N I+ K+ G D   ++T+
Sbjct: 243 EINTIWNKWLGPDTEYKMTR 262