Pairwise Alignments

Query, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  117 bits (294), Expect = 2e-31
 Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 1/184 (0%)

Query: 20  GAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIYIEIVRNTPFLVQIFLLYFG 79
           G W TL ++ ++ ++G+ +G      + S    L    TIY+E+VR TP LVQIF+ YF 
Sbjct: 120 GLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLVQIFIFYFF 179

Query: 80  LASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQIEAAECLGLSKWRIGWHVM 139
           + +  + +    A + A+ +   AY AEI+RAG++S+ RGQ EAA  LGLS  +   HV+
Sbjct: 180 IGTV-LNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSASQSMRHVV 238

Query: 140 LQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTVQSDTFRSLETYIVVAALYL 199
           L  + ++V P L  QF+ +++ +++ S I+  EL      V + +F   E    VA LYL
Sbjct: 239 LPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEILFCVAGLYL 298

Query: 200 VLSL 203
           +++L
Sbjct: 299 LINL 302