Pairwise Alignments

Query, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 320 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  118 bits (296), Expect = 1e-31
 Identities = 63/184 (34%), Positives = 107/184 (58%), Gaps = 1/184 (0%)

Query: 20  GAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIYIEIVRNTPFLVQIFLLYFG 79
           G W TL ++ ++  +G+ +G      + S    L    T+Y+E+VR TP LVQIF+ YF 
Sbjct: 121 GLWTTLWISVVSGALGLVIGLFAGLCRLSNNPTLRDLSTVYVELVRGTPLLVQIFIFYFF 180

Query: 80  LASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQIEAAECLGLSKWRIGWHVM 139
           + +  + +    A V A+ +   AY AEI+RAG++S+ +GQ EAA  LGL+  +   HV+
Sbjct: 181 IGTV-LNLSREFAGVAALALFTGAYVAEIVRAGVQSIAKGQNEAARSLGLNAGQSMRHVI 239

Query: 140 LQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTVQSDTFRSLETYIVVAALYL 199
           L  + ++V P L  QF+ +++ +++ S I+  ELT       + +F + E +  VA LYL
Sbjct: 240 LPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELTKSGREAITTSFSTFEIWFCVAGLYL 299

Query: 200 VLSL 203
           +++L
Sbjct: 300 LINL 303