Pairwise Alignments

Query, 249 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 230 a.a., polar amino acid ABC transporter, inner membrane subunit from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  255 bits (651), Expect = 6e-73
 Identities = 115/221 (52%), Positives = 173/221 (78%)

Query: 1   MKYSLDFAPLASYWPVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIY 60
           ++Y  +FA + + WP F+ GAW+T++++  A V+G  +GTL A  +R ++R +SR C  Y
Sbjct: 1   LQYEFEFASVLAAWPQFLEGAWMTIQLSFPATVLGFVIGTLCAIGRRGQVRWVSRLCGAY 60

Query: 61  IEIVRNTPFLVQIFLLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQ 120
           +E++RNTP LVQ+FL++FGLAS G ++  F AA++++VIN+AAY+ EI+RAG++S+ +GQ
Sbjct: 61  VEVIRNTPLLVQVFLVFFGLASLGWKVSAFTAALVSLVINVAAYSCEIMRAGMDSIHKGQ 120

Query: 121 IEAAECLGLSKWRIGWHVMLQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTV 180
           +EAAECLGL++ ++ WHV+L+P++EKVYPALTSQF+L+M A+++ SQIS EELTAIA  V
Sbjct: 121 LEAAECLGLTRRQVYWHVILRPAMEKVYPALTSQFVLLMLATSITSQISVEELTAIAARV 180

Query: 181 QSDTFRSLETYIVVAALYLVLSLFIKLVTWALGEYLFRRRR 221
           QS+TFR  E YI+VA  YL LSL +++  W  G+ +F R+R
Sbjct: 181 QSETFRPFEAYILVAVAYLALSLLMRVGLWLFGQAVFTRKR 221