Pairwise Alignments

Query, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

Subject, 282 a.a., glycine betaine ABC transporter (permease) from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 5e-29
 Identities = 65/185 (35%), Positives = 109/185 (58%), Gaps = 3/185 (1%)

Query: 308 LWKLARQHLFLVALSVGIAILIGVPIAILVFPHVRLRAVVLGFASLLQTVPSLALLAVLI 367
           LW    Q L LV +S G+ +L+GVP+ IL+      R ++L    ++QT+P+   L  ++
Sbjct: 91  LWDKLLQTLALVLVSTGLCVLVGVPLGILLAARPLARRLLLPVLDVMQTLPAFVYLIPVL 150

Query: 368 SMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLRLVLLPL 427
            + G +G +PA+ A  +Y+L P++R T  GL+++   L  A   LG +  Q LR + LPL
Sbjct: 151 MLFG-LGKVPAVFATLIYALPPLVRLTELGLSQIDPSLLQAAHGLGASRWQRLRRIALPL 209

Query: 428 ALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGL-ALNDRELLLAGALPAAALAL 486
           ALP+++AG+  +  +A+    +A+ IGA G GE ++ G+  LN  + + AG L   ALA+
Sbjct: 210 ALPSIMAGLNQSVMMALSMVVVASMIGARGLGEDVLAGIQTLNVGQGMEAG-LAIVALAM 268

Query: 487 VSEGV 491
           V + +
Sbjct: 269 VIDRI 273