Pairwise Alignments

Query, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

Subject, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 1e-25
 Identities = 66/192 (34%), Positives = 103/192 (53%), Gaps = 5/192 (2%)

Query: 303 LFGPDLWKLARQHLFLVALSVGIAILIGVPIAILVFPHVRLRAVVLGFASLLQTVPSLAL 362
           LFG   W+     + LV  SV +++LIG+P  IL+      R +V     ++QT+P+   
Sbjct: 499 LFG--FWERTISTIALVGASVLLSLLIGIPTGILLAKRALARRLVTPLLDVMQTLPTFVY 556

Query: 363 LAVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPPQSLRL 422
           L   ++   ++G  PA+IA  +++L P++R T  G+ EVP     A  A G TP Q+L  
Sbjct: 557 LIPAVAFF-SVGKTPAVIATVIFALAPMIRLTALGIQEVPKAAVEAAVAHGATPWQTLTR 615

Query: 423 VLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLA-LNDRELLLAGALPA 481
           V LPLA  +LL GV     +++    +AA IGAGG G  ++T L  +   E +LAG +  
Sbjct: 616 VELPLASGSLLLGVNQTIVMSLSMVVVAALIGAGGLGYDVMTALRNIKGGEGVLAG-IAI 674

Query: 482 AALALVSEGVFE 493
              ALV + + +
Sbjct: 675 VFCALVPDRIIQ 686



 Score = 28.5 bits (62), Expect = 8e-04
 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 26/136 (19%)

Query: 341 VRLRAVVLGFASLLQ----TVPSLALLAVLISMLGAIGALPALIALTLYSLLPIMRNTVT 396
           V +R V+ G    L      VP+LAL+ +     GAI AL   +AL    L      T++
Sbjct: 449 VAVRTVINGVEGALGWIPWPVPALALVYLAWRSAGAILALTTALALGYIGLFGFWERTIS 508

Query: 397 GLA------------EVPNGLRLAGTALG---MTPPQSLRLVLLPLALPTLLAGVRTATA 441
            +A             +P G+ LA  AL    +TP     L+ +   LPT +  +     
Sbjct: 509 TIALVGASVLLSLLIGIPTGILLAKRALARRLVTP-----LLDVMQTLPTFVYLIPAVAF 563

Query: 442 IAIG--TATIAAFIGA 455
            ++G   A IA  I A
Sbjct: 564 FSVGKTPAVIATVIFA 579