Pairwise Alignments

Query, 508 a.a., ABC transporter, substrate-binding protein (cluster 13, osmolytes) / ABC transporter, permease protein (cluster 13, osmolytes) from Variovorax sp. SCN45

Subject, 247 a.a., putative Glycine betaine/carnitine/choline ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 7e-37
 Identities = 90/204 (44%), Positives = 119/204 (58%), Gaps = 6/204 (2%)

Query: 300 TAKLFGPDLWKLARQHLFLVALSVGIAILIGVPIAI-LVFPH-VRLRAVVLGFASLLQTV 357
           T   +  DL    + HL LV  S+  A+ +G+P  I L  PH V      + F ++  T+
Sbjct: 40  TIARYRDDLGFYLQAHLVLVLASMAAALAVGIPAGIALSRPHRVDKAERFMQFFNVGNTI 99

Query: 358 PSLALLAVLISMLGAIGALPALIALTLYSLLPIMRNTVTGLAEVPNGLRLAGTALGMTPP 417
           P LA+LA+ +S+LG IGA PA+ AL L SLLPI+RNT  GL  VP  L+ A T +GMTP 
Sbjct: 100 PPLAVLAIALSILG-IGAGPAIFALFLASLLPIVRNTYEGLKNVPASLKEAATGIGMTPR 158

Query: 418 QSLRLVLLPLALPTLLAGVRTATAIAIGTATIAAFIGAGGFGERIVTGLALNDRELLLAG 477
           Q L  V LP A+P ++ GVR A A+ +GTA +A  IGA   G  I  G+ALN++  LL G
Sbjct: 159 QQLWQVELPNAVPIIVGGVRVALALNVGTAPLAFLIGANSLGSLIFPGIALNNQPQLLLG 218

Query: 478 ALPAAALALVSEGVFELIEFLMRR 501
           A   A LALV +     + F  RR
Sbjct: 219 AACTALLALVLDAA---VSFSSRR 239