Pairwise Alignments

Query, 390 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 406 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 79.3 bits (194), Expect = 2e-19
 Identities = 94/376 (25%), Positives = 159/376 (42%), Gaps = 26/376 (6%)

Query: 4   RHLIQTAALSALALSMSLASAQDNKFKIGLILPMTGQSAST---GRQIEA--AARLYMAQ 58
           R L+  AA+ AL      A A+D   K+G++  M+G  A     G  + A  AA  +MA+
Sbjct: 10  RALLAAAAIGALLTGA--AKAEDTTVKLGVLNDMSGVYADISGPGSVVAAQMAADDFMAK 67

Query: 59  NGDTVAGKKVELIVKDDTGLPDVTKRLAQELVVNDKVNVLAGFGLTPLALAVAPIATQSK 118
           N     G K+E++  D    PDV   +A++    + V+ +     + +ALAV+ I  +  
Sbjct: 68  N----KGFKIEVVGADHQNKPDVGASIARKWYDQENVDAILDVTTSSVALAVSDITKEKN 123

Query: 119 TPEVVMAAATSSITEA--SPYIIRSSFTLPQVSVAMGDWAPKNGVKTVVTLVADYGPGND 176
              +V    TS +T A  SP  +  ++    ++   G    K G      + ADY  G  
Sbjct: 124 KIFLVSGGGTSDLTGAKCSPNTVHWTYDTWALANGTGSALTKQGGSPWFFITADYAFGAA 183

Query: 177 AEKFFSERFVLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQF 236
            E+  S      GGKV   ++ PL N DF+ FL + + +    + +          +KQ 
Sbjct: 184 LERDASAAVKAAGGKVAGSVKHPLSNTDFSSFLLQAQSSGAKVIGLANAGNDLITAVKQA 243

Query: 237 LERGMDKAGIKMIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPS--AMNKKFVEAFEK 294
            E G+ + G ++      + D +   +      V+T   Y   +    A +K+F   F  
Sbjct: 244 SEFGITQGGQQLAGLLIFSSDVKALGLQAAQGLVLTDAFYWDLNDDTRAFSKRFGAKF-- 301

Query: 295 ANPKMRPNFMAVGGYDGMRVIYEALKTTKGQGGGEALLAAMKGQVFESP---RGQVLIDA 351
            N KM P     G Y        A+K  K +   + ++  M+      P   +G++ ID 
Sbjct: 302 -NGKM-PTSAQAGVYSSAMHYLNAIKDAKTKDAPK-VMEQMRATPINDPLFGKGEIRIDG 358

Query: 352 QTRDIVQDVYLRKVEK 367
           +    +  +YL KV+K
Sbjct: 359 RA---IHPMYLLKVKK 371