Pairwise Alignments

Query, 390 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 397 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

 Score = 98.6 bits (244), Expect = 3e-25
 Identities = 101/364 (27%), Positives = 171/364 (46%), Gaps = 23/364 (6%)

Query: 10  AALSALALSMSLASAQDNKFKIGLILPMTGQSASTGRQIEAAARLYM-AQNGDTVAGKKV 68
           A L+A++L+ S A A+D   KI  I P+TG +++TG     +A L +   N    A    
Sbjct: 18  ATLAAVSLAASPALARDT-VKIAFIGPLTGGNSATGLGGRNSAALAVDLHNAKPDAKYTY 76

Query: 69  ELIVKDDTGLPDVTKRLAQELVVNDKVNVLAGFGLTPLALAVAPIATQSK--TPEVVMAA 126
           EL+  DD   P+V  ++A +   +DK +++AG      A+A+A + T ++   P VV  A
Sbjct: 77  ELVPFDDECKPNVGVQVATK-AASDK-SIIAGITHYCSAVAIATVDTYNRFGLPVVVWGA 134

Query: 127 ATSSITEASPY--IIRSSFTLPQVSVAMGDWAPKNGVKTVVTL--VADYGPGNDAEKFFS 182
               IT  + Y  I R + T+        ++  K G KT V +    DYG G +  K+F+
Sbjct: 135 VLPEITYGNDYKEIHRVNGTMINEGKMAAEFLTKQGFKTFVVIHDTTDYGKGQN--KYFA 192

Query: 183 ERFVLNGGKVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAGAAVMKQFLERGMD 242
           E     GG+++    VP    DF   L KV++ KPD +F+   +  G  V  Q     MD
Sbjct: 193 ENLKPQGGEILATFPVPPDQQDFTAELTKVKELKPDVVFIGGLTPLGVRVRSQ-----MD 247

Query: 243 KAGI--KMIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPSAMNKKFVEAFEKANPKMR 300
           + GI  ++     +     +   G  A G V+ H+ +     A  K F++A+ KA  +  
Sbjct: 248 RLGIPAQLAGVSGIMSAGFIEGAGPAAEGTVSFHNGAPLTKYADGKAFMDAYAKAGYRED 307

Query: 301 PNFMAVGGYDGMRVIYEAL-KTTKGQGGGEALLAAMKGQVFESPRGQVLIDAQTRDIVQ- 358
           P+      +    +I +A+ K    +     +L   KG  +++  G++  D   ++IV  
Sbjct: 308 PDAYGPFAFSAANLIMDAIEKVGPDRKKVRDVLNTTKG--YKALVGEINFDDHRQNIVSA 365

Query: 359 DVYL 362
           +VY+
Sbjct: 366 NVYV 369