Pairwise Alignments

Query, 390 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 402 a.a., ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score = 88.2 bits (217), Expect = 4e-22
 Identities = 109/408 (26%), Positives = 178/408 (43%), Gaps = 27/408 (6%)

Query: 1   MQRRHLIQTAALSALALS--MSLASAQDNKFKIGLILPMTGQSAST-----GRQIEAAAR 53
           M RR ++++ AL+AL     M  ASA D   KIG I   T   A T     G Q+  A  
Sbjct: 1   MDRRTVLKSFALAALMAGSQMGTASAADT-IKIGEINSYTSLPAFTLPYRSGWQL--ALD 57

Query: 54  LYMAQNGDTVAGKKVELIVKDDTGLPDVTKRLAQELVVNDKVNVLAGFGLTPLALAVAPI 113
              A  G  + GKK+E+I +DD G P      A ELV  + V+VL G   + + LAV+  
Sbjct: 58  EINAAGG--INGKKLEVISRDDGGKPGDAVTAANELVSRENVSVLFGTFFSHIGLAVSDF 115

Query: 114 ATQSKTPEVVMAAATSSIT--EASPYIIRSSFTLPQVSVAMGDWAPKNGVKTVVTLVADY 171
           A Q K   V     T ++T  + + Y  R        +  + D A K   KT  T+  +Y
Sbjct: 116 ANQRKIVFVAAEPLTDALTMEKGNRYTFRLRPGTYMQAAMLVDQAAKLPAKTWATVAPNY 175

Query: 172 GPGNDAEKFFSERFVLNGG--KVIEKLRVPLRNPDFAPFLQKVRDAKPDALFVFVPSGAG 229
             G  A K F E         K +++    +   D    +Q +  A+P+A+F        
Sbjct: 176 EYGQVAVKVFKELMSAKRPDIKWVDEQWPAMGKIDGGATVQALARAEPEAIFNVTFGADL 235

Query: 230 AAVMKQFLERGMDK-AGIKMIATGDVTDDDQLNDMGDGALGVVTSHHYSAAHPSAMNKKF 288
              +++   RG+ K   +  + TG+    D L D  +   G + S +      +  ++ F
Sbjct: 236 TKFIREGNTRGLFKNRSVVSLLTGEPEYLDPLGD--ETPSGWIVSGYPWEQIKTPEHEAF 293

Query: 289 VEAFEKANPKMRPNFMAVGGYDGMRVIYEALKTTKGQGGGEALLAAMKGQVFESPRGQVL 348
           ++A+ KA     P   +V GY+ M+ + E ++   G    + L+AA +G   +SP G + 
Sbjct: 294 LKAY-KAKFNDYPRLGSVVGYNTMKAVAEMIRKA-GSVDTDKLIAAGEGLKIDSPLGPIT 351

Query: 349 IDAQTRDIVQDVYLRKVEKKDGQLYNVEF------DVIKSVKDPGKAK 390
             A+        Y+ K   KDG+   V++      D + ++ +  KA+
Sbjct: 352 FRAEDHQSTMGGYIGKTAMKDGKGMMVDWHYANGADYLPALAEVAKAR 399