Pairwise Alignments

Query, 290 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 305 a.a., urea ABC transporter, permease protein UrtB from Pseudomonas sp. S08-1

 Score =  139 bits (350), Expect = 8e-38
 Identities = 92/291 (31%), Positives = 155/291 (53%), Gaps = 13/291 (4%)

Query: 6   FDGIAYGMLLFVLAVGLAVTLGLMNFINLAHGAFAMAGGYLT--VFAMQKLGLP------ 57
           F+G++   +L ++A+GLA+  G M  IN+AHG F   G Y T  V ++ +   P      
Sbjct: 16  FNGLSVFCVLLLMALGLAIIFGQMGVINMAHGEFLTIGAYTTFVVSSLTEQYAPAFGPYY 75

Query: 58  FLACLPLAFIVVALAGALLERTLYRPMYGKPHLDQVLFSIGLAFMAVAAIDYFVGSSQQN 117
           F   + L+F++    G L+E  +   +Y +P LD +L + GL+ +   A     G+ + +
Sbjct: 76  FFFAIVLSFLIAGAIGWLVEWAMISKLYQRP-LDTLLATWGLSLVMQQAFRSIFGAREVS 134

Query: 118 VQLPEWLRGRTEIGDGAFMLGMGHYRLFIIGVCAVLTVVLQLILSKTRFGSRLRAAVDDP 177
             LPEWL G     +    + +    LF++G+  +LT  + L+L ++R+G ++RA + + 
Sbjct: 135 ATLPEWLMGSWNPTE---TIDIPRNGLFVMGLTILLTATIFLMLYRSRWGLQVRATMQNR 191

Query: 178 RVAAGLGINVNIVFLLTFAVGSGLAGLGGALGAEILGLDPTFPLKYMIYFLIVVSVGGTS 237
            ++  +GIN   V  +TFA+G G+AG+ GA    I    PT    Y++   +VV  GG +
Sbjct: 192 VMSRAVGINTKRVDRMTFALGCGVAGVAGAAFTTIGSTGPTAGSLYIVDTFLVVVFGGAA 251

Query: 238 SITGPLAAALLLGIADVAGKYFIP-KMGAFTVYLLMILILMWRPQGLFTRK 287
           S+ G +A+A  +  A    ++F+   M        +ILILM RPQGLF+ K
Sbjct: 252 SLFGTIASAFSIAQAQSIMEFFMSGSMAKVLTLSAVILILMMRPQGLFSIK 302