Pairwise Alignments

Query, 253 a.a., ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 255 a.a., branched chain amino acid transporter - ATP binding subunit from Pseudomonas putida KT2440

 Score =  184 bits (466), Expect = 2e-51
 Identities = 111/255 (43%), Positives = 152/255 (59%), Gaps = 11/255 (4%)

Query: 1   MSDTVLSTHGLVMRFGGITATNNVTMELKRGARHALIGPNGAGKTTLINQLTGVLTPTEG 60
           MS  +L   GL MRFGG+ A N V + +K     ALIGPNGAGKTT+ N LTG   P+ G
Sbjct: 1   MSREILQVSGLSMRFGGLLAVNGVALTVKEKQVVALIGPNGAGKTTVFNCLTGFYKPSGG 60

Query: 61  RITLLGEDITKLAPHKRVARGLVRTFQINQLFDSMTPLETLALVVSQHQGAGAQWWRPL- 119
            I L G+ I  LA H+   +G+VRTFQ  +LF  MT LE   L+++QH+     ++  L 
Sbjct: 61  TILLDGQPIQGLAGHQIARKGVVRTFQNVRLFKEMTALEN--LLIAQHRHLNTNFFAGLF 118

Query: 120 ------GASKAITERAAQLLEQFHLSDVARQQVKHLAYGKRRLLEIAIALACEPRVLLLD 173
                  + K   ERA   LE+ +L++ A +    LAYG++R LEIA  +  +PR+++LD
Sbjct: 119 KTPSFRRSEKEAMERAQYWLEKVNLTEFANRTAGTLAYGQQRRLEIARCMMTQPRIIMLD 178

Query: 174 EPVAGVPAGEREELLQTVAAL--PADVSVLLIEHDMDLVFSFADRMTVLVNGTLLTEGDP 231
           EP AG+   E E+L   +A L    +V+VLLIEHDM LV S +D + V+  GT L  G P
Sbjct: 179 EPAAGLNPKETEDLKALIAYLRESHNVTVLLIEHDMKLVMSISDHIVVINQGTPLAHGTP 238

Query: 232 ETIANDPKVKEVYLG 246
           E I ++P V + YLG
Sbjct: 239 EQIRDNPDVIKAYLG 253