Pairwise Alignments

Query, 681 a.a., DNA primase DnaG from Variovorax sp. SCN45

Subject, 657 a.a., DNA primase from Pseudomonas simiae WCS417

 Score =  418 bits (1075), Expect = e-121
 Identities = 228/511 (44%), Positives = 306/511 (59%), Gaps = 33/511 (6%)

Query: 9   IPASFIQELIARADVVEIVGRYVPLKKAGANFMGLCPFHGEKSPSFSVSPTKQFYHCFGC 68
           IP SFI +L+ R D+V++V   V LKKAG N+   CPFH EK+PSFSVSP KQFY+CFGC
Sbjct: 5   IPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGC 64

Query: 69  GVHGNAIGFLMEHAGMGFVEAVHDLADQYGLQVPEDDASPAERARAASQRQKQATLTDVL 128
           G  GNA+GFLM+H  + F +A+ DLA   G++VP +++    + R  +     + L  +L
Sbjct: 65  GAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEVPREESGRPHKPRQPTD----SPLYPLL 120

Query: 129 EKAGDAYRKHLRQAP---GAIEYLKGRGVSGEVAKQFGIGYAPAGWRALASVFPD--YDD 183
             A D YR+ L+  P    A++YLKGRG++GE+A+ FG+G+AP GW  L           
Sbjct: 121 TAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180

Query: 184 PLLTESGLVIVNNEEGKLSDEEAKRYDRFRDRVMFPIRNVKGECIGFGGRVLGDEKPKYL 243
             + ++GL++ N E GK       RYDRFRDRVMFPIR+ +G  I FGGRVLGD+KPKYL
Sbjct: 181 KAMIDAGLLVENAETGK-------RYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYL 233

Query: 244 NSPETPVFSKGRELYGLYEARAAFRDRGYALVTEGYMDVVALAQLGFPNAVATLGTACTS 303
           NSPETPVF KG+ELYGL+EAR   R+    +V EGYMDV+ALAQ G  NAVATLGTA + 
Sbjct: 234 NSPETPVFHKGQELYGLFEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSE 293

Query: 304 EHVQKLFRFTESVVFSFDGDAAGRRAARKALDGALPYATDVRSIKFLFLPAEHDPDSFIR 363
           EH+++LFR   SV+F FDGD AGR AA +AL+  L    D R  +FLFLP   DPD+ +R
Sbjct: 294 EHMKRLFRVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVR 353

Query: 364 EHGAEAF-ARFVTEATPLSRFMLEAAREGCDLTTAEGRAHMTSNVRPLWSAMPDGALKRQ 422
             G +AF AR    A PL+ +  +   E  D  + EG+AHM +   PL   +P   LK  
Sbjct: 354 SEGTDAFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLKSL 413

Query: 423 LLSEIATLVQLDAPALSELWASTPGPRKAGGGALAAQRHNEPPMYTGGDGDDYYPDMPPP 482
           +   +  +  L   A+S+L  +TP              H+ PP     D    Y  MP  
Sbjct: 414 MRMRLQEITGLSGEAVSQLVHNTP--------------HDAPP--PAYDPGMDYDAMPDY 457

Query: 483 QDYEPPRYESDSKPKFQPQRKFTKGKRWGGK 513
            D+  P+     + ++ P++    GK+W  K
Sbjct: 458 SDFHQPQEAYAPQQEWTPKKSGNDGKKWEKK 488