Pairwise Alignments

Query, 681 a.a., DNA primase DnaG from Variovorax sp. SCN45

Subject, 660 a.a., DNA primase from Pseudomonas putida KT2440

 Score =  409 bits (1052), Expect = e-118
 Identities = 237/546 (43%), Positives = 313/546 (57%), Gaps = 35/546 (6%)

Query: 9   IPASFIQELIARADVVEIVGRYVPLKKAGANFMGLCPFHGEKSPSFSVSPTKQFYHCFGC 68
           IP SFI +LI R D+V++V   V LKK G N+   CPFH EK+PSF+VSP KQFY+CFGC
Sbjct: 5   IPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGC 64

Query: 69  GVHGNAIGFLMEHAGMGFVEAVHDLADQYGLQVPEDDASPAERARAASQRQKQATLTDVL 128
           G  GNA+GF+M+H  + F +AV +LA   G++VP +     ++ R  +     + L  +L
Sbjct: 65  GAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPREQGRRDQKPRQPTD----SPLYPLL 120

Query: 129 EKAGDAYRKHLRQAPG---AIEYLKGRGVSGEVAKQFGIGYAPAGWRALASVF--PDYDD 183
           + A + YR+ LR  P    A++YLKGRG+SGE+A+ FG+G+AP GW  L           
Sbjct: 121 DAASEFYRQALRSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLGADTLQQ 180

Query: 184 PLLTESGLVIVNNEEGKLSDEEAKRYDRFRDRVMFPIRNVKGECIGFGGRVLGDEKPKYL 243
            ++ ++GL+I N E GK       RYDRFRDRVMFPIR+ +G  I FGGRVLGD+KPKYL
Sbjct: 181 KVMIDAGLLIENAESGK-------RYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYL 233

Query: 244 NSPETPVFSKGRELYGLYEARAAFRDRGYALVTEGYMDVVALAQLGFPNAVATLGTACTS 303
           NSPETPVF KG+ELYGLYEAR   R+    +V EGYMDV+ALAQ G  NAVATLGTA + 
Sbjct: 234 NSPETPVFHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSE 293

Query: 304 EHVQKLFRFTESVVFSFDGDAAGRRAARKALDGALPYATDVRSIKFLFLPAEHDPDSFIR 363
           EH+++LFR   SV+F FDGD AGR+AA +AL+  L    D R  +FLFLP   DPDS +R
Sbjct: 294 EHLKRLFRVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVR 353

Query: 364 EHGAEAF-ARFVTEATPLSRFMLEAAREGCDLTTAEGRAHMTSNVRPLWSAMPDGALKRQ 422
             G +AF AR    + PL+ +  E      D  + EG+AHM +   PL   +P   L++ 
Sbjct: 354 AEGTDAFMARINQHSQPLADYFFEQLGVEADPRSLEGKAHMATLAAPLIEKIPGANLRQL 413

Query: 423 LLSEIATLVQLDAPALSELWASTPGPRKAGGGALAAQRHNEPPMYTGGDGDDYYPDM--P 480
           + + +  +  LD   + +L    P           +   +  P Y       Y PD    
Sbjct: 414 MRNRLKEITGLDPQQVEQLAQQAPA---------TSSMPDYDPGYDYDAMASYTPDYGDM 464

Query: 481 PPQDYEPPRYESDSKPKFQPQRKFTKGKRW-----GGKFEEPIEPLRGRGAPPSRPD--V 533
           P  DY P   E   KP     +K    K W     GGK  +  +    R   P  P    
Sbjct: 465 PQHDYAPVHQEQAWKPNKGGSKKPWSDKPWDKNRKGGKPWQQRDEAPPRVPAPVEPPTLA 524

Query: 534 AVRLLL 539
           A+R LL
Sbjct: 525 ALRTLL 530