Pairwise Alignments

Query, 509 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 516 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

 Score =  163 bits (413), Expect = 1e-44
 Identities = 149/510 (29%), Positives = 229/510 (44%), Gaps = 33/510 (6%)

Query: 6   PAAADPRRRLALVAAVYLGSFIATLDVSIVNVALPTLQRALSTDLAGLQW------VIDI 59
           P A   RR    V +V LG+F+A LD+ I N +L  +Q ALS  L    W      V +I
Sbjct: 9   PTAEPTRRDWIAVMSVMLGAFMAVLDIQITNSSLKDIQGALSATLEEGSWISTSYLVAEI 68

Query: 60  YALCLSAFMLSAGPLGDSYGRKRAWLAGVIVFTLGSAMCALAGNLPTLLAGRAVQGVAGA 119
             + L+A+++       S  R   W++G   F L S +C++A NL +++  RA+QG  G 
Sbjct: 69  IMIPLTAWLVQLL----SARRLAVWVSGG--FLLSSLLCSMAWNLESMILFRALQGFTGG 122

Query: 120 LLIPGALSLLAHAFPEPASRARVIGGWSSFTALSLILGPMLGGLLVDHAGWQSIFLINLP 179
            LIP A +L     PE   RA+ +  ++     +  +GP LGG L ++ GW+ IF IN+P
Sbjct: 123 ALIPLAFTLTLIKLPEH-HRAKGMAMFAMTATFAPSIGPTLGGWLTENWGWEYIFYINIP 181

Query: 180 IGVLTVGLGLWGI-RETAHPE-HAALDPVGQVLSVLWLGALTYGLIVAGEHGWGSVQAAS 237
            G+L +   L+G+ ++ AH E   + D  G V   L LG L   L       W       
Sbjct: 182 PGLLMIAGLLYGLEKKEAHWELLKSTDYAGIVTLGLGLGCLQVFLEEGHRKDWLESHLIV 241

Query: 238 ALVAAA-VGLVLFLVVEARVARPLLPLGLFRDARFSVTNFASFVLGFSSYASLFFFSLFL 296
            L + A V L+ F++++     PL+ L +  +  F +++ AS  +G   Y S++   L+L
Sbjct: 242 GLGSVALVSLITFVILQFSKPHPLINLRILGNRNFGLSSIASLGMGVGLYGSIYLLPLYL 301

Query: 297 QQVQGWSPSDTG----WRLVPQFVATGVVASQFGRLARRFDVHTLMVAGYTLIGGSMLLL 352
            QVQG++    G    W  +PQ     +V     +L +      L   G+ L G +    
Sbjct: 302 AQVQGYNALQIGEVIMWMGIPQLFLIPLVP----QLMKVISPKVLCALGFCLFGAASFGS 357

Query: 353 TLFSADTPYAPMALLFLFLGAGAGLAVPATSTAVMASVPAQRSGMASATMNALRQAGMLI 412
            + + D        + +    G  + +   S    A +  Q +G AS+  N LR  G  I
Sbjct: 358 GVLNPDFAGPQFNHIQIIRALGQPMIMVTISLIATAYIQQQDAGSASSLFNILRNLGGAI 417

Query: 413 GIALLGTLMSTRATSLLADSLEHAGLSGARQAAVDAVS-----RHDLHALSSLDAGIAHE 467
           GIALL TL+  R T +  D L  + +    Q A           +D  AL  L      +
Sbjct: 418 GIALLATLLDAR-TKVYFDYLRESVVPSNPQVAERLAQLAERLGNDNAALGKLSEITHQQ 476

Query: 468 LLATALAGGFH---AAMACAGVAGLLAAGL 494
            L  A    FH     +A + VA LL   L
Sbjct: 477 ALIMAYNDAFHFVGIGLAVSMVAVLLTRKL 506