Pairwise Alignments

Query, 655 a.a., Excinuclease ABC subunit C from Variovorax sp. SCN45

Subject, 607 a.a., excinuclease ABC subunit C from Pseudomonas simiae WCS417

 Score =  508 bits (1307), Expect = e-148
 Identities = 289/641 (45%), Positives = 385/641 (60%), Gaps = 58/641 (9%)

Query: 20  PGVYRYFDAAGAVLYVGKARNLRKRVANYFQKNHGGTRIGHMISKIVRMETTVVRSEAEA 79
           PGVYR FD+   +LYVGKA+NL+ R+A+YF+K+    +   ++++I ++ETT+  +E EA
Sbjct: 18  PGVYRMFDSEARLLYVGKAKNLKNRLASYFRKSGLAPKTAALVARIAQVETTITANETEA 77

Query: 80  LLLENNLIKTLKPRYNILFRDDKSYPYLKIASHQFPRLAYYRGAVDKKHRYFGPYPSAWA 139
           LLLE  LIK  +P YNIL RDDKSYPY+ ++   FPRL+ +RGA  +K +YFGPYPSA A
Sbjct: 78  LLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRGAKKQKGKYFGPYPSAGA 137

Query: 140 VKESIQLLQKVFRLRTCEDTVYANRTRPCLLYQIKRCSGPCVGHIAPDAYAQDVASAEAF 199
           ++ES+ LLQK F +R CED+ Y NRTRPCL YQIKRC  PCVG + P  YA+DV  +  F
Sbjct: 138 IRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVEPAEYAEDVRHSVMF 197

Query: 200 LMGDTQLVLSKLEQRMMTHAEKLEFEQAAELRNQMSAISRVLHQQSIEIASDKDVDILAV 259
           L G +  +  +L   M   A  L+FE+AAELR+Q+S + RV  QQS+E     DVD++A 
Sbjct: 198 LEGRSNALTDELSGAMEQAASTLDFERAAELRDQISLLRRVQDQQSME-GGTGDVDVIAA 256

Query: 260 KVQGGKACVNLAMVRGGRHLGDRPYFPVHVEDAVQIHHGELDGDEGDDAGPAAADPIEVQ 319
            V  G ACV+L  VRGGR LG + +FP                           D    +
Sbjct: 257 FVNPGGACVHLISVRGGRVLGSKNFFP-----------------------QTGIDEDVAE 293

Query: 320 VLEAFIAQHYIDVP---VPATLVLS--QQVSRELIEAISQQAGSRVTAVFQPREQRRHWL 374
           V+ AF+ Q+Y+  P   +P+ L+++   +    LIEAI +  G  +    + R  R  W 
Sbjct: 294 VMAAFLGQYYVSSPERDLPSELIVNVVHEDFPTLIEAIHELRGRELDISHRVRGTRARWQ 353

Query: 375 EMAETNAGLQLARLLAEEGSQQARTRALTDALELASDDLDTFRVECFDISHTAGEATQAS 434
           ++A TNA   L+  LA      AR  AL + L L   D    R+EC+DISH++GEAT AS
Sbjct: 354 QLAVTNAEQALSARLANRQHVAARFDALAEVLNL---DEPPQRLECYDISHSSGEATVAS 410

Query: 435 CVVFEHHAMQNKEYRRYNIEGITPGDDYAAMRQVLHRRYGKLAEAMAAETDALPPGDAES 494
           CVVF        +YRRYNIEG+T GDDYAAM Q L RR+ KL                  
Sbjct: 411 CVVFGPEGPIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSKL------------------ 452

Query: 495 ESADAPPKPRTARMPDLVLVDGGKGQVSMAREVFGELGLPLSLIVGVEKGEGRKVGLEEL 554
                  K    ++PD++LVDGGKGQ+SMAR+V  EL +P  +++GV KG  RK G E L
Sbjct: 453 -------KDGEGKLPDILLVDGGKGQLSMARDVLNELAVPDLILLGVAKGATRKAGFETL 505

Query: 555 VFADGREKVYLGKDSAALMLVAQIRDEAHRFAITGMRAKRAKVRVGGSQLEDIPGIGPKR 614
              D   +  L  DS AL L+ QIRDEAHRFAITG RA+R K R   S LE + G+GP R
Sbjct: 506 YLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITGHRARRGKTR-RTSTLEGVAGVGPTR 564

Query: 615 RARLLQRFGGIRGVAAASVEDIASVEGIASDLAEEIYKALH 655
           R  LL+ FGG++ ++ AS+++IA   GI+  LAE IY  LH
Sbjct: 565 RRDLLKHFGGLQELSRASIDEIAKAPGISKKLAELIYANLH 605