Pairwise Alignments

Query, 655 a.a., Excinuclease ABC subunit C from Variovorax sp. SCN45

Subject, 607 a.a., UvrABC system protein C from Pseudomonas putida KT2440

 Score =  505 bits (1301), Expect = e-147
 Identities = 290/642 (45%), Positives = 389/642 (60%), Gaps = 60/642 (9%)

Query: 20  PGVYRYFDAAGAVLYVGKARNLRKRVANYFQKNHGGTRIGHMISKIVRMETTVVRSEAEA 79
           PGVYR FD    +LYVGKA+NL+KR+A+YF+K     +   ++++I ++ETT+  +E EA
Sbjct: 18  PGVYRMFDGEARLLYVGKAKNLKKRLASYFRKTGLAPKTAALVARIAQVETTITANETEA 77

Query: 80  LLLENNLIKTLKPRYNILFRDDKSYPYLKIASHQFPRLAYYRGAVDKKHRYFGPYPSAWA 139
           LLLE NLIK  +P YNIL RDDKSYPY+ ++  +FPRL  +RGA   K RYFGPYPSA A
Sbjct: 78  LLLEQNLIKEWRPPYNILLRDDKSYPYVFLSDGEFPRLGIHRGAKKAKGRYFGPYPSAGA 137

Query: 140 VKESIQLLQKVFRLRTCEDTVYANRTRPCLLYQIKRCSGPCVGHIAPDAYAQDVASAEAF 199
           ++ES+ LLQK F +R CED+ YANRTRPCL YQIKRC GPC   +  + YA+DV  +  F
Sbjct: 138 IRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCTDLVTAEEYAEDVRHSVMF 197

Query: 200 LMGDTQLVLSKLEQRMMTHAEKLEFEQAAELRNQMSAISRVLHQQSIEIASDKDVDILAV 259
           L G +Q + ++L   M   A  L+FE+AAELR+Q++ + RV  QQ IE  S  DVD++A 
Sbjct: 198 LEGRSQQLGNELNAEMEKAAMALDFEKAAELRDQIALLRRVQDQQYIEGGSG-DVDVIAA 256

Query: 260 KVQGGKACVNLAMVRGGRHLGDRPYFP-VHVEDAVQIHHGELDGDEGDDAGPAAADPIEV 318
            V  G ACV+L  VRGGR LG + +FP V +E+ V                         
Sbjct: 257 FVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEV------------------------A 292

Query: 319 QVLEAFIAQHYI---DVPVPATLVLS--QQVSRELIEAISQQAGSRVTAVFQPREQRRHW 373
           +V+ AF++Q+Y+   +  +P  L+++   +    + EA+    G  +T   + R  R  W
Sbjct: 293 EVMAAFLSQYYLGNAERELPGELIVNVVHEDFNAITEALHTLRGRELTISHRVRGTRARW 352

Query: 374 LEMAETNAGLQLARLLAEEGSQQARTRALTDALELASDDLDTFRVECFDISHTAGEATQA 433
            ++A TNA   L   LA      AR  AL + L L   D    R+EC+DISH++GEAT A
Sbjct: 353 QQLAVTNAEQALNARLANRQHMAARFEALAEVLGL---DEVPQRLECYDISHSSGEATVA 409

Query: 434 SCVVFEHHAMQNKEYRRYNIEGITPGDDYAAMRQVLHRRYGKLAEAMAAETDALPPGDAE 493
           SCVVF        +YRR+NIE +T GDDYAAM Q L RRYG++                 
Sbjct: 410 SCVVFGPEGPIKSDYRRFNIEDVTAGDDYAAMHQALTRRYGRI----------------- 452

Query: 494 SESADAPPKPRTARMPDLVLVDGGKGQVSMAREVFGELGLPLSLIVGVEKGEGRKVGLEE 553
                   K    ++PD++LVDGGKGQ++MAR+V  ELG     ++GV KG  RK G E 
Sbjct: 453 --------KDGEGKLPDVLLVDGGKGQLNMARDVMQELGFTDLTLLGVAKGVTRKAGFET 504

Query: 554 LVFADGREKVYLGKDSAALMLVAQIRDEAHRFAITGMRAKRAKVRVGGSQLEDIPGIGPK 613
           L   D   +  L  DS+AL L+ QIRDEAHRFAITG RA+R K R   S LED+ G+GPK
Sbjct: 505 LYLNDVHHEFTLKGDSSALHLIQQIRDEAHRFAITGHRARRGKAR-RVSSLEDVAGVGPK 563

Query: 614 RRARLLQRFGGIRGVAAASVEDIASVEGIASDLAEEIYKALH 655
           RR  LL+ FGG++ +  AS+++IA   GI+  LAE IY +LH
Sbjct: 564 RRRDLLKHFGGLQELNRASIDEIAKAPGISKKLAESIYASLH 605