Pairwise Alignments

Query, 468 a.a., Replicative DNA helicase (DnaB) (EC 3.6.4.12) from Variovorax sp. SCN45

Subject, 465 a.a., putative Phage DNA helicase from Pseudomonas putida KT2440

 Score =  218 bits (555), Expect = 3e-61
 Identities = 145/444 (32%), Positives = 231/444 (52%), Gaps = 17/444 (3%)

Query: 29  EAESSVLGGLLLDNGAWDRMGDLLVDGDFYRHEHKLIYAAIGGLINASKPADVITVYEQL 88
           EAE  V+G L+      + +G  +    F++ +   +++ I    +A +PAD +++ +  
Sbjct: 11  EAEFGVIGSLMHQPSLIETIGAKISPMHFHQQDAAELFSMILAARSAGRPADPVSLADIR 70

Query: 89  QNLGKADEIGGLVYLNSLAQYVPSASNIRRYAEIVRERSILRKLVSAADEIATQAFNPQG 148
             L   +    LV    + +   S +N   YA IV ERS  R +      I   A   Q 
Sbjct: 71  PTLSNGEMT--LVRAAEIMRNTVSVANANEYARIVVERSKARVVNDLGQTIINLA--SQA 126

Query: 149 KQVDKILDEAEQKIFNIGEEGTR--MKQGFQSMDALVVELLDRVTEMAENPNDITGIRTG 206
           + + +I+ E ++   ++  E     +    +++  ++ E+ DR      N   I G+ TG
Sbjct: 127 RPIAQIIAEVQEAALSLNSEDDEPDVITLAEALGPVIDEMDDRF-----NGRGINGLSTG 181

Query: 207 FHDFDKMTSGLQPGDMIVLAARPSMGKTSLAINIAEHVALEEGLPVAVFSMEMGASQLAV 266
             D D +  GL+   +I++A RP  GKT+L + IAE++ + E     VFS+EM   +LA 
Sbjct: 182 LPDLDDLIQGLRGSHVIIVAGRPGTGKTTLGLGIAEYLTIRESKSALVFSLEMAGKELAK 241

Query: 267 RIVGSIGRIDQGHLRTGKL--SDEEWPRLTEAIEKLRTVSLHIDETPGLSTSELRANARR 324
           R + S   +  G++ TGK     E+  ++T A+ ++R   L I +  GL  S +R N  R
Sbjct: 242 RSLASASSVTTGNIDTGKAMADGEKIQKITAAVGRMRDADLRICQKGGLPLSRIR-NIAR 300

Query: 325 LARQYGRLGLIVVDYLQLMSTS-SSGDENRATAVGEISRGLKMLAKELKCPVIALSQLSR 383
              +   L LIV+DY+ L++    S  +NR   +G ISRG+K +AKEL  PVI L+QL+R
Sbjct: 301 FQHKAKPLDLIVIDYIGLIAPEPGSRQQNRNLELGAISRGIKAMAKELDVPVIVLAQLNR 360

Query: 384 GVESRTDKRPMMSDLRESGAIEQDADIIMFIYRDDYYDKNSKEPGVAEVIISKHRNGPTG 443
           G+E+RT K+P MSDLR+SG IEQDADII+  +RD   D +  + GV E+ + KHR+ P G
Sbjct: 361 GIETRTAKKPQMSDLRDSGEIEQDADIILIAHRD--ADSDLGQSGVTEIDVVKHRHAPVG 418

Query: 444 TVKLAFLKPITKFENLASYSHNEQ 467
              L       +F N A     +Q
Sbjct: 419 HCLLQHQGEFARFANYAGAREQQQ 442