Pairwise Alignments

Query, 873 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Variovorax sp. SCN45

Subject, 865 a.a., Clp protease ClpC from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  644 bits (1662), Expect = 0.0
 Identities = 384/878 (43%), Positives = 535/878 (60%), Gaps = 110/878 (12%)

Query: 13  ALGDAQSLALGNDNAYIEPAHLLAAMLRQDDGPR-ALLERAGVNVPGLTQAAEAAIKKLP 71
           +L   +++ LG+D  YI   HL+  M+R+ +G   ALL++ GV++  L  A E A +   
Sbjct: 14  SLSREEAIRLGHD--YIGTEHLVLGMIREGEGTAVALLKKLGVSIDELKYALEQATRNTA 71

Query: 72  QVQGH--DIVQVGPELGKLLQATEKEAIKRNDQFIAGELFLLALADSKADIGKTA----- 124
               +    + +  +  K+L+ T  EA       I  E  LL++   + +I         
Sbjct: 72  SQSSNITGSIPLTKQTEKVLKITYLEAKIFKSDIIGTEHLLLSILRDEDNISSQILGKFN 131

Query: 125 -------------KENGLSRKSLEAAIDAVR------GGQGVNSADAEGQRE---ALKKY 162
                          N L+    + + D+ +         G +S+   G++     L  +
Sbjct: 132 VNYEAIRDSLDYHSNNPLASSDTDDSDDSDKLFGSSSSRSGSSSSKKPGEKSRTPVLDNF 191

Query: 163 CMDLTERARLGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIV 222
             DLT+ A   KLDP++GR++EI R  QVL RR KNNP+LIGEPGVGKTAI EGLA RIV
Sbjct: 192 GRDLTKLAEDDKLDPIVGREKEIERVAQVLSRRKKNNPILIGEPGVGKTAIAEGLALRIV 251

Query: 223 AGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERLKTVLNELAKDEGQTIVFIDELHTMV 282
             +V   L  KRV++LD+A+L+AG K+RG+FEER+K V+NEL K     I+FIDELHT+V
Sbjct: 252 QKKVSRVLFNKRVVTLDLASLVAGTKYRGQFEERMKAVMNELEKSP-DVILFIDELHTIV 310

Query: 283 GAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKIIVGEPSVE 342
           GAG A G++DA NM KPALARGE+ C+GATTLDEYR+YIEKD AL RRFQ ++V   + E
Sbjct: 311 GAGGASGSLDASNMFKPALARGEIQCIGATTLDEYRQYIEKDGALARRFQIVMVDPTTPE 370

Query: 343 ATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRYITDRFLPDKAIDLIDEAAAKIKIE 402
            TI IL  +++KY+ HH V  TD AI A  +LSDRY++DRFLPDKAID++DEA A++ I 
Sbjct: 371 ETIEILNNIKDKYQDHHHVNYTDKAIEACVKLSDRYMSDRFLPDKAIDILDEAGARVHIN 430

Query: 403 MDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKRLGLIEDEIVKLQKEIADYDEIWQA 462
               P+ + +L+ ++  +++E+                   + +VK QK    Y+E    
Sbjct: 431 NIVVPDDILKLEEQIENIKVEK-------------------NRVVKSQK----YEE---- 463

Query: 463 EKAQAQGSAQVREDVDKIKFQIEEWKRKGDFNKVAELQYGQLPALEKRLKEAEASEASKG 522
                  +AQ+R+   K+  Q++  K+  +                         E +K 
Sbjct: 464 -------AAQLRDKEKKLIDQLDSAKKNWE-------------------------EETKK 491

Query: 523 KSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQGERDKLLVMEDKLHERVVGQDEAIGA 582
           K       R QV  E +AEV+A  TGIPV ++ Q E  KLL M ++L  +V+GQD+AIG 
Sbjct: 492 K-------RYQVKEENVAEVIAMMTGIPVKRIAQKEGVKLLNMGEELKGKVIGQDKAIGQ 544

Query: 583 VANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTELCKALAGFLFDSEDHLIRIDMSEFME 642
           +  AI+R+R GL DP +P GSF+FLGPTGVGKTEL K LA +LFD ED L+RIDMSE+ME
Sbjct: 545 LVKAIQRTRVGLKDPKKPIGSFVFLGPTGVGKTELAKVLATYLFDKEDSLVRIDMSEYME 604

Query: 643 KHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLDDGRL 702
           K SV+RL+GAPPGYVGYEEGG LTE +RRKPYSVVLLDE+EKAHPDV+N+LLQVLDDG L
Sbjct: 605 KFSVSRLVGAPPGYVGYEEGGQLTEKIRRKPYSVVLLDEIEKAHPDVYNLLLQVLDDGIL 664

Query: 703 TDGQGRTVDFKNTVIVMTSNIGSPIIQ---AMVGKPSEEIKEAVWD--------ELKNYF 751
           TDG GR VDF+NT+I+MTSNIG+  +Q   A +G  S+  +E V D         LK  F
Sbjct: 665 TDGLGRKVDFRNTIIIMTSNIGARDLQDFGAGIGFMSKSKQENVDDIMKGTIASALKKTF 724

Query: 752 RPEFLNRIDETVVFHALDAKNIESIAAIQLKVLQARLAKMDLGLEVSPAALAEIAKVGFD 811
            PEFLNR+D+ +VF++L+ +++  I  + L  L  R+  +   +E++  A   +A+ G+D
Sbjct: 725 SPEFLNRLDDVIVFNSLNREDMHKIIELSLSKLFTRVESLGYTIELTKEAKDFVAEKGYD 784

Query: 812 PVFGARPLKRAIQQRIENPLSKLLLDGSFGPKDTIEVT 849
           P +GARPL RAIQ+ IE+P+++ +L       D I+V+
Sbjct: 785 PKYGARPLNRAIQKYIEDPIAEEILKAEVNQGDVIQVS 822