Pairwise Alignments

Query, 461 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  153 bits (386), Expect = 1e-41
 Identities = 117/424 (27%), Positives = 199/424 (46%), Gaps = 35/424 (8%)

Query: 2   PPRHRIVPLIVASPLFLQNLDTSVMATALPTIAKALDVSVLHLNLAITSYLLSLAVFLPV 61
           PP   +  + ++   F+Q LDT++   ALPTI+  L VS       ITS+ +S A+ LP+
Sbjct: 11  PPSLLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPL 70

Query: 62  SGWLAERFGPRRVFCVAVAFFSLGSTLCGAAQTLPQLVAFRVLQGLGGAMMLPVGRLILL 121
           +GWL+ RFG  ++F  A   F L S LCG AQ++P+LV FRVLQG+    + P+ + +L+
Sbjct: 71  TGWLSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLI 130

Query: 122 RSVPPAQMVSAMVWFTVPPAFGRLAGPLFGGAIVTLASWRWIFLINIPFGLLAIAGALRF 181
              PPA+   A+    +      +AGP+ GG I    SW WIF IN+P GL A A   + 
Sbjct: 131 AVYPPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQ 190

Query: 182 INDLPEDSSPAPFDIEGFVLLAVGLTSLL------GSLEMVGKSLLPVPAIWAMAGFGVL 235
           +   P  +S  P D  G + L +G+ +L         L+    S + V ++ ++    V 
Sbjct: 191 MRTRPVVTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVF 250

Query: 236 VSLVYHLRSRNKAAPLIDLGILRFSTYRAS---IIGGTPLRIAIGASPFLLPLMLQ---- 288
           V  ++ L  R+   P+++L +     +R     ++GG      I     +LP  LQ    
Sbjct: 251 V--IWELTDRH---PVVNLRLFVHRNFRIGTIVLVGGYAGFFGIN---LILPQWLQTQMG 302

Query: 289 -----LGFGLSPLASGSLTMATALGSLATRTVMAKAIRTIGFRSLLVGATCLTSLFYVSY 343
                 G  ++P+    + M+  +G  A R  +       G   L +G +C     + S 
Sbjct: 303 YTATWAGLAVAPIGLLPVIMSPFVGKYAHRFDLRV---LAGLAFLAIGTSCYMRAGFTSE 359

Query: 344 GHFRPSTPHVQIFVTLLFGGLVNSMAMVSLQTLGFSQIPKPRMSHAATLNSMAQQLSLSL 403
             F+       + +  LF G+  ++  +   ++  S +P  +++  + L +  + L  S 
Sbjct: 360 VDFQ------HVALVQLFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSF 413

Query: 404 GVTL 407
             +L
Sbjct: 414 AASL 417