Pairwise Alignments

Query, 295 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 294 a.a., putative LysR-type transcriptional activator protein from Pseudomonas putida KT2440

 Score =  153 bits (386), Expect = 5e-42
 Identities = 106/297 (35%), Positives = 150/297 (50%), Gaps = 17/297 (5%)

Query: 3   RHI-PSTRALLIFDAVARHHGVGKAAEELCLTHSAVSQQLRLLESQIGVRLVQRTARGTE 61
           RH+ PS   LL F+A ARH    +AA EL LT SAVS+Q++ LE Q+G+ L +R  R  +
Sbjct: 4   RHLTPSMSLLLAFEAAARHESYTRAAAELSLTQSAVSRQVQALEQQLGLTLFRREGRQVQ 63

Query: 62  LTEPGRRYHGQISGDLLRLQNHTLEAMAQRTDGLRLLVGAVPVLAEGWLTPRLPEFIAQH 121
           LT+ GR Y  ++S  L R+++ TL+A+A ++    L +  +P     WL PRL  F + H
Sbjct: 64  LTDVGRLYQRELSEALGRIRSATLQALAYQSGVGTLRLATLPTFGSKWLLPRLHAFYSAH 123

Query: 122 PGCSLHLQVFPTHLYMEDLPFDVGVQYDDAVWPGANALP------LMGEPCVVVCSPKA- 174
           PG  +H+     H  +E + FD   + D A+   ++ LP      L  E  VV+  P+A 
Sbjct: 124 PGMLVHI-----HSRIETINFDTS-EIDAAIGVASHDLPGLVCHRLHAEELVVILPPEAG 177

Query: 175 KGRAAMARGDFRAAPLLHLRTRMGAWEEWFGHAANARAPENLVAGHRFDLFSSLVAAVRA 234
            G    +        LL++     AW EWF H         L  G  F+L S L+ AVRA
Sbjct: 178 VGSQGWSPARISEEVLLNVANNPHAWGEWFSHHGLPHRAMRL--GPSFELTSHLIQAVRA 235

Query: 235 DLGVGLVPEYFIERELRSGELVLACPERVPSSRGYSVFVAPSRTDDALVGAFVEWLL 291
            +G+GLVP   +E EL  GEL  +      S R Y +   P       + AF  WLL
Sbjct: 236 GIGIGLVPRILVEEELAKGEL-YSPGVAFASQRSYYLIYPPRNEALPSLRAFRGWLL 291