Pairwise Alignments

Query, 290 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 271 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  140 bits (352), Expect = 4e-38
 Identities = 83/262 (31%), Positives = 131/262 (50%), Gaps = 6/262 (2%)

Query: 21  PANSVGPLTPHLYAPDAVRPLRAKEHFLSADTLVELHEHPWPQLTFSTRGVIRLSTQDGS 80
           P    G    +L   D  R L A     +A      H H   QL ++  GV+R   Q   
Sbjct: 11  PVELNGRSEDYLDYQDVPRVLMALVRNQAAGAYNAPHTHRHGQLLYAVSGVMRAVAQGSL 70

Query: 81  YIVPPSRALWVPANMPHSITLIEDAELRTVYLHAWIAPTW-EKCEVLEISPLLRALMLAL 139
           + +PP RALW+PA   H   ++   ++R++Y+ A  A  + ++C ++++S LLR L+L L
Sbjct: 71  WFLPPKRALWIPAEEEHDQLMLTPVQMRSIYIQADAAAGFGDRCRIVDVSLLLRELILVL 130

Query: 140 DTTPDGLPPADPHAPQRERMIAPLLVDEVERATQIRIDVPLPADKRLRQLCEVLLRNPAD 199
              P      +     R   +  L++ E+  A  + + +P P D+RL  +C  +L  P  
Sbjct: 131 ANEP-----IEYELEGRNSHVVALILSELAAARTLPLQIPWPVDRRLLVVCRAILEAPGQ 185

Query: 200 RATLAERAATIGASERTVARLFRDQLGMSWQQWRQQAVMAHALPLLARGMAVSQVAAASG 259
              +   A  +GAS RT+ RLF  + G++++QW QQ  +A AL  L  G  + ++A   G
Sbjct: 186 THRVEYWADQVGASSRTLIRLFLKETGLTYRQWVQQVRLACALERLENGEPIGRIAQDLG 245

Query: 260 YATDSAFCAMFKAATGRSPTSF 281
           Y + SAF AMF+ A G SP  F
Sbjct: 246 YVSASAFSAMFRRAIGVSPRDF 267