Pairwise Alignments

Query, 303 a.a., Site-specific tyrosine recombinase XerD from Variovorax sp. SCN45

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

 Score =  135 bits (339), Expect = 2e-36
 Identities = 99/282 (35%), Positives = 147/282 (52%), Gaps = 7/282 (2%)

Query: 22  EDGLSKNTLAAYRRDLALFAQWLGEHSGGATLGTAKETDLQAYMGARLSNRGKAT-SANR 80
           E  +S++T   YRRDL     +  EH  G     A +      + ARL + G++  S  R
Sbjct: 15  ERQVSEHTSQGYRRDLEKVIAYCEEH--GIADWQALQIQQLRQLIARLHHHGQSPRSLAR 72

Query: 81  RLTVFKRYYRWALRERRIAADPSIRLMPARQMPRAIKTLSEKQVDDLLAAPDVESPLGLR 140
            L+  +  YR+  RE     DP+  L   +   R  K L   +   LL     +  +  R
Sbjct: 73  LLSAVRGLYRYLNREGLCQHDPANGLSAPKGERRLPKVLDTDRALQLLDGGVDDDFIARR 132

Query: 141 DRAMLELMYASGLRVSELVALKAIDMSLNDGVLRVLGKGSKERLVPFGGEARRWIERYLE 200
           D+A+LEL Y+SGLR+SEL  L    + L  G+++VLGKG K R++P G +AR  ++ +  
Sbjct: 133 DQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWY- 191

Query: 201 ESRPAILDGQQTPDLFVTARGAGMTRVMFWIIVKKHATAAGIHVPLSPHTLRHAFATHLL 260
             R   +   +   +F+T +G  ++     + VK  A    +   L PH LRH+FA+H+L
Sbjct: 192 --RLRGIGNPRDRAVFITRQGNRISPRAVRLRVKV-AGERELGQHLHPHMLRHSFASHVL 248

Query: 261 NHGVDLRAVQLLLGHADISTTTIYTHVARERLKQLHAKHHPR 302
               DLRAVQ +LGHADISTT IYTH+  + L  ++   HPR
Sbjct: 249 ESSQDLRAVQEMLGHADISTTQIYTHLDFQHLAAVYDSAHPR 290