Pairwise Alignments

Query, 403 a.a., Uncharacterized MFS-type transporter from Variovorax sp. SCN45

Subject, 375 a.a., putative arabinose efflux permease AraJ, MFS family from Escherichia coli ECRC101

 Score =  130 bits (327), Expect = 6e-35
 Identities = 108/381 (28%), Positives = 171/381 (44%), Gaps = 20/381 (5%)

Query: 28  FITILTEAMPAGLLPQIGASLAVTPALVGQLVTVYALGSLVAAIPLVAFTRGWRRRPLLM 87
           F+ I +E MP  LL  I   L VT  L G+ + +    +++ ++ L        R+ LL+
Sbjct: 6   FVLIASEFMPVSLLTPIARDLGVTEGLAGRGIAISGALAVLTSLTLSTLAGKMNRKFLLL 65

Query: 88  LAIGGFAIVNTVTALSHSYPLTLAARFFAGVFAGLLWALVAGHAGRMVPPSMQGRAIAVA 147
                 A+   + AL+ SY + +  R   GV  G  W++ A  A R+VP     RA+A+ 
Sbjct: 66  GMTVLMAVSGLIIALATSYLMYMVGRAMIGVAIGGFWSMSAATAIRLVPQHQVTRALAIF 125

Query: 148 MLGAPLALSLGIPAGTLLGTGVGWRPAFLVMSALSVLLLGWVRWQVPDFPGQEAGR-RQS 206
             G  LA  +  P G+ LG  VGWR AFL +  ++V+      WQ    P  +A +   S
Sbjct: 126 NAGNALATVVAAPLGSYLGATVGWRGAFLCLVPMAVVAF---IWQCISLPSMDANKSHTS 182

Query: 207 VKRVFLLPGVRPVLGVMLA---FVLAHNILYTYIAPFLAHA----GLGARVDLVLLVFGT 259
              VF L   R V+  M+A   F +    L+TY+ PFL        LG  + L+LL+ G 
Sbjct: 183 CGAVFRLFSRRMVVVGMIACGLFFMGQFALFTYVRPFLESVTRVNSLG--LSLILLIIGV 240

Query: 260 ASLAGIWVTGVLIDRWLRELVLASTAVFGLTALLLGTAAGSTAAVYVGVAIWGLAYGGAG 319
           A   G  V  + ++R     ++A   +  + A+ L         V + + +WG+    A 
Sbjct: 241 AGFIGTLVVSIFLNRKFYPTLMAIPGLMAVIAIGLMLTGHHVWMVSLLLGLWGMLATAAP 300

Query: 320 TLFQTASAQAAGESADVAQSMVVTVWNIAIAGGGLLGGLLLQGGGAGALPWSLLVLLVPA 379
           T + T  A+   ++A+    ++V V  ++IA G   GG++        L W     +   
Sbjct: 301 TGWWTWIARTLPDNAEAGGGLMVAVIQLSIALGSTAGGIVFD-----RLGWQSTFAMSSV 355

Query: 380 LWLTWRAGAHGFPGSRGVAGA 400
           L L   AG   F  +R  AGA
Sbjct: 356 LLLC--AGVLTFVTARQKAGA 374