Pairwise Alignments

Query, 665 a.a., DNA topoisomerase IV subunit B (EC 5.99.1.3) from Variovorax sp. SCN45

Subject, 631 a.a., DNA topoisomerase IV subunit B from Dickeya dianthicola ME23

 Score =  620 bits (1600), Expect = 0.0
 Identities = 326/653 (49%), Positives = 432/653 (66%), Gaps = 28/653 (4%)

Query: 16  SGYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHIIQEVIDNAADEALAGHGKKIKVTLHAD 75
           S Y+  +I VL GLEPV++RPGMYT T  P H+ QEVIDN+ DEALAGH ++I V LH D
Sbjct: 4   SSYNADAIEVLSGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHARRIDVILHPD 63

Query: 76  GSVSIEDDGRGIPFGLHPEEKAPVVELVYTRLHAGGKFDKGSGGAYSFSGGLHGVGVSVT 135
            S+ + DDGRG+P  +HPEE  P VEL+  RLHAGGKF   S   Y FSGGLHGVG+SV 
Sbjct: 64  QSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKF---SNKNYQFSGGLHGVGISVV 120

Query: 136 NALSKRLEVSTHREGSIAKLAFSGGDVIEQLEVRKLEAGERKQGTTVRAWPDAKYFETAA 195
           NALS R+EV+  R+G +  +AF  GD ++ L V     G R  GT V  WPD  +F++  
Sbjct: 121 NALSTRVEVTVRRDGQVYDIAFENGDKVQDLTVTGT-CGRRNTGTRVHFWPDVTFFDSPR 179

Query: 196 LPMGELTHLLRSKAVLMPGVSVTLTNEKTKESQQWLYKGGLSDYLMQTLNGDPVIPLFEG 255
             +  LTHLL++KAVL PGV +   +      Q+W Y+GGLSDYL + +NG P +P    
Sbjct: 180 FSVLSLTHLLKAKAVLCPGVEIVFKDGVNDTEQRWCYQGGLSDYLCEAVNGLPTLP---- 235

Query: 256 GGHADKNADNFAEG--EGADWCVAFT-EDGQPVRESYVNLIPTSAGGTHESGLRDGLFTA 312
               +K       G  E  +W + +  E G+ + ESYVNLIPT  GGTH +GLR GL  A
Sbjct: 236 ----EKPFIGVIPGDTEAVEWALLWLPEGGELLTESYVNLIPTLQGGTHVNGLRQGLLDA 291

Query: 313 VKGFIELHSLLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQIKERLNSRDAVRLVSSFV 372
           ++ F E  ++LP+GVKL  ED++ R +YVLS K+ DPQF GQ KERL+SR +   VS  V
Sbjct: 292 MREFCEFRNILPRGVKLSAEDIWERCAYVLSLKMQDPQFAGQTKERLSSRQSAAFVSGVV 351

Query: 373 RPALELWLNQHVDYGKKLAELAIKAAQTRQRAGQKVEKRKGSGVAVLPGKLTDCESKDIS 432
           + A  LWLNQ+V   ++LAE+AI +AQ R RA +KV ++K +    LPGKL DC  +D++
Sbjct: 352 KDAFSLWLNQNVQAAEQLAEMAISSAQRRMRAAKKVVRKKLTSGPALPGKLADCTLQDLN 411

Query: 433 HNEVFLVEGDSAGGSAKMGRDKESQAILPLRGKVLNTWEVERDRLFANTEIHDISVAVGV 492
             E+FLVEGDSAGGSAK  RD+E QAI+PL+GK+LNTWEV  D + A+ E+HDISVA+G+
Sbjct: 412 KTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEVSSDEVLASQEVHDISVAIGI 471

Query: 493 DPHGPNDTPDMSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIEAGHVYVAKPPL 552
           DP    D+ D+S LRYGK+CIL+DAD DG HI  LL  LF RHF  L++ GHV+VA PPL
Sbjct: 472 DP----DSDDLSQLRYGKVCILADADSDGLHIATLLCALFVRHFRALVQGGHVHVAMPPL 527

Query: 553 FRVDAPARGKKPASKVYALDEGELTATLDKLRKDGVREGAWSISRFKGLGEMSAEQLWET 612
           +R+D    GK+     YALDE E    L++L++   ++G  ++ RFKGLGEM+  QL ET
Sbjct: 528 YRIDL---GKE---VYYALDEEEKAGILEQLKR---KKGKPNVQRFKGLGEMNPMQLRET 578

Query: 613 TLNPDTRRLMQVQLGRFDFTSTQGEITKLMGKGEAAARRELMELRADDVDIDV 665
           TL+P+TRRL+Q+ +   D   T   +  L+ K  A  RR  ++ + D  ++DV
Sbjct: 579 TLDPNTRRLVQLTINEQDIEQTLATMDMLLAKKRAEDRRNWLQEKGDKAELDV 631