Pairwise Alignments

Query, 801 a.a., DNA topoisomerase IV subunit A (EC 5.99.1.3) from Variovorax sp. SCN45

Subject, 752 a.a., DNA topoisomerase IV, A subunit, proteobacterial from Enterobacter asburiae PDN3

 Score =  543 bits (1399), Expect = e-158
 Identities = 312/731 (42%), Positives = 445/731 (60%), Gaps = 60/731 (8%)

Query: 19  LTLADYAQTAYLEYALSVVKGRALPDVSDGQKPVQRRILYSMSRMGLGFGGTNGTVGAKP 78
           L L ++ + AYL Y++ V+  RALP + DG KPVQRRI+Y+MS +GL     N T  AK 
Sbjct: 8   LALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGL-----NAT--AKF 60

Query: 79  VKSARVVGDVLGRFHPHSDQAAYDALVRMAQDFSQRYPLVDGQGNFGSRDGDGA-AAMRY 137
            KSAR VGDVLG++HPH D A Y+A+V MAQ FS RYPLVDGQGN+G+ D   + AAMRY
Sbjct: 61  KKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRY 120

Query: 138 TEARLARITSLLLDEIDEGTVDFIPNYDGSTEEPRLLPARLPFTLLNGASGIAVGLATEI 197
           TE+RL++   +LL E+ +GTVD++PN+DG+ +EP++LPARLP  LLNG +GIAVG+AT+I
Sbjct: 121 TESRLSKYAEVLLGELGQGTVDWVPNFDGTMQEPKMLPARLPNILLNGTTGIAVGMATDI 180

Query: 198 PSHNLREIADACVALIKSNGKLSEEELFAIVPGPDYPGGAQIISNASDIADAYRTGRGSL 257
           P HNLRE+A A + LI+   K + +EL  IV GPD+P  A+II++ ++I   Y+ GRGS+
Sbjct: 181 PPHNLREVAKAAITLIEQP-KATLDELLDIVQGPDFPTEAEIITSRAEIRKIYQNGRGSV 239

Query: 258 KVRARWKIEELARGQWQLVVNELPPGVSTQKVLEEIEEITNPKVKAGKKALSADQTQLKA 317
           ++RA W  E+ A     +V+  LP  VS  KVLE+I                   +Q++ 
Sbjct: 240 RMRAVWNKEDGA-----VVITALPHQVSGAKVLEQIA------------------SQMRN 276

Query: 318 AMLSVLDVVRDESSKDAAVRLVFEPKTSRISQDEFITTLLAQTSLETSSPINLTMVGIDG 377
             L ++D +RDES  +   RLV  P+++R+  ++ +  L A T LE S  INL M+G+DG
Sbjct: 277 KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMEQVMNHLFATTDLEKSYRINLNMIGLDG 336

Query: 378 KPTQKSLRQMLNEWIAFREVTVEKRSRHRLNKVLDRIHILEGRQLVLLNIDEVIAIIRAA 437
           +P  K+L ++L EW+ FR  TV +R  HRL KVL R+HILEG  +  LNIDEVI IIR  
Sbjct: 337 RPAVKNLLEILTEWLTFRRDTVRRRLNHRLEKVLKRLHILEGLLVAFLNIDEVIEIIRTE 396

Query: 438 EDPKAALIARFNLSDRQAEDILEIRLRQLARLEAIKIEQELSGLRDEQKKLEDILGSPAA 497
           ++PK AL++RF +S+ QAE ILE++LR LA+LE +KI  E + L  E+ +L+ IL S   
Sbjct: 397 DEPKPALMSRFGISETQAEAILELKLRHLAKLEEMKIRGEQNELEKERDQLQAILASERK 456

Query: 498 LRRLLVKEIEADAKTFEDPRRTLIQAEKRAVA---EVKVVDEPVTVIVSQKGWVRAQKGW 554
           +  LL KE++ADA  F D RR+ +   + A A         EPVT+++SQ GWVR+ K  
Sbjct: 457 MNTLLKKELQADADAFGDDRRSPLHEREEAKAMNEHDMQPSEPVTIVLSQSGWVRSAK-- 514

Query: 555 ASEKAAAANGGNGASAPEYSFKSGDSLYGAFECRSVDTLLVFGSAKDKSVRVYTVPVASL 614
                     G+   AP  S+K+GDS   A + +S   +       D + R Y +   +L
Sbjct: 515 ----------GHDIDAPGLSYKAGDSFKAAVKGKSNQPVAFI----DSTGRSYAIDPITL 560

Query: 615 PGARGDGQPVTTLIELDAGTHVTHFFAGPVGASVLLANTGGYGFIATVENMMSRQRGGKA 674
           P ARG G+P+T  + L  G  V H         +LLA+  GYGFI T  +++SR R GKA
Sbjct: 561 PSARGQGEPLTGKLTLPPGATVDHMLMEADDQKLLLASDAGYGFICTFNDLVSRNRAGKA 620

Query: 675 FIDVGEGEQLCRPSLVGGASGAEPMPAATHVACASTGGRILTFDITELKSLPKGGRGLTL 734
            I + +   +  P ++   S          +   +T GR+L F +++L  L K G+G  +
Sbjct: 621 LISLPDNAHVMAPLVIENESDM--------LLAITTAGRMLMFPVSDLPELSK-GKGNKI 671

Query: 735 IDLEPKDTLAG 745
           I++   +   G
Sbjct: 672 INIPSAEAAKG 682