Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 319 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  131 bits (330), Expect = 1e-35
 Identities = 73/204 (35%), Positives = 117/204 (57%), Gaps = 3/204 (1%)

Query: 14  WPL--LLKGTWITIQLSLIATVLGLVVAIFCAWGKTSGPGWLRFIINAYIEVIRNTPFLV 71
           W L  L+ G W T+ LS+++ +LGL++ +     + S    LR +   Y+E++R TP LV
Sbjct: 112 WALGPLMWGLWTTLWLSVVSGILGLIIGLATGLCRLSSNPTLRDLSTIYVELVRGTPLLV 171

Query: 72  QLFFFFFALPAIGLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPKGQIEAGRALNLKP 131
           Q+F F+F +  + L  S + A + A+ +  GAY  EI+RAG++SI +GQ EA R+L L  
Sbjct: 172 QIFIFYFFIGTV-LNLSREFAGIAALSLFTGAYVAEIVRAGVQSITRGQNEAARSLGLSA 230

Query: 132 WEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQSQTFRSFEIY 191
            +  R V++  A K + P L  QFI L+  +++VSVI+  +L      + + +F  FEI 
Sbjct: 231 SQSMRHVVLPQAFKRVLPPLAGQFISLVKDTSLVSVIAITELLKSGREVITTSFSPFEIL 290

Query: 192 IVVAAIYLALALAFSAMFKLIYKR 215
             VA +YL + L  S M   + +R
Sbjct: 291 FCVAGLYLLINLPLSKMASRLERR 314