Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  130 bits (327), Expect = 2e-35
 Identities = 72/202 (35%), Positives = 117/202 (57%), Gaps = 1/202 (0%)

Query: 3   YQFQFDAVFAAWPLLLKGTWITIQLSLIATVLGLVVAIFCAWGKTSGPGWLRFIINAYIE 62
           Y + F  +++   LLL G   T+  +++  VLGL + +    G+ S   W+   I AYIE
Sbjct: 45  YDWDFGVLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIE 104

Query: 63  VIRNTPFLVQLFFFFFALPAI-GLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPKGQI 121
           V R TP LVQL +F++ALP + GL  S   AA + + +  GA+ +EI+R GI SI  GQ+
Sbjct: 105 VFRCTPVLVQLVWFYYALPVLTGLEISAVAAATLCLSLYGGAFYSEIVRGGIISIDNGQV 164

Query: 122 EAGRALNLKPWEIFRFVIIKPALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQ 181
           EA RAL +   ++ R +++  A K + P L SQ I+ + +++++SV++  DL      + 
Sbjct: 165 EAARALGMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLLYQGQVIA 224

Query: 182 SQTFRSFEIYIVVAAIYLALAL 203
            +T+R  E+Y  +A  Y A+ L
Sbjct: 225 HETYRPLELYTFIAVAYFAVLL 246