Pairwise Alignments

Query, 223 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  134 bits (337), Expect = 1e-36
 Identities = 74/194 (38%), Positives = 114/194 (58%), Gaps = 2/194 (1%)

Query: 15  PLLLKGTWITIQLSLIATVLGLVVAIFCAWGKTSGPGWLRFIINAYIEVIRNTPFLVQLF 74
           PL+L+G W+T+Q++   ++L +V A   A GK S    LR+    YIE+ R T  LVQLF
Sbjct: 6   PLMLQGAWVTLQITFFGSLLAIVAATLAALGKMSTWRPLRWFCVVYIEIFRGTSLLVQLF 65

Query: 75  FFFFALPA--IGLRWSPQTAALVAMVVNLGAYATEIIRAGIESIPKGQIEAGRALNLKPW 132
           + FF LP     L  SP T A+V + +++GAY  EI+R  I S+ KGQ EA  ALN +P+
Sbjct: 66  WLFFVLPLPPFNLELSPYTVAIVGLGLHIGAYGAEIMRGAINSVAKGQYEACTALNFRPF 125

Query: 133 EIFRFVIIKPALKAIYPALTSQFILLMLSSAVVSVISADDLTSVAANLQSQTFRSFEIYI 192
             FR +I+  AL A     T+  I L+ ++++VS+I+  DL+  A  L   TF + +++ 
Sbjct: 126 TRFRRIILPQALLAAMGPGTNLLIELLKNTSLVSLITLADLSFRARQLDQATFETLKVFA 185

Query: 193 VVAAIYLALALAFS 206
           +   +Y  +A A +
Sbjct: 186 LALLMYFVMAQAIN 199