Pairwise Alignments

Query, 265 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 261 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  184 bits (466), Expect = 2e-51
 Identities = 96/258 (37%), Positives = 142/258 (55%), Gaps = 1/258 (0%)

Query: 6   TRRAAIAALGLGAALTVFAPFACAQSVADIKKKGEITIGMLVDFPPYGTTDAKNQPDGYD 65
           +RR  +A   +   L  F+P A A ++ DI  +G I + +  DFPP+G+      P GYD
Sbjct: 3   SRRLLLAIAAVSVTLG-FSPAAFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGYD 61

Query: 66  ADVAKLLAKDWGVKANIVPVTGPNRIPFLLTNKVDLLVASLAITPERAKQVQFSQPYAAA 125
            DVA L+ +  GVK  +VPVT  NR+P+L TNKVDL+++SL   P+R K + FS  YA  
Sbjct: 62  IDVANLIGEKLGVKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAPF 121

Query: 126 TIVLYGASKTPIKAAADLKGLRVGVARASTQDVAVTKAAPEGTEIRRFDDDASAMQALIS 185
              ++      +  A DL G  +GV R + +D+ +TK AP  T I+R++D+   + A ++
Sbjct: 122 FNGVFAPDSVTVAKAEDLSGKTIGVTRGAVEDLELTKVAPADTTIKRYEDNNGTISAFLA 181

Query: 186 GQVDAIGCSVTVAAQIAKRVPANTYENKFTLVQQSMGIAMRPGQEELTKAVNEFVQKNTA 245
           GQV+A+     VAA I  + P    E KF +      I +   Q  L + VN  +     
Sbjct: 182 GQVEAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATAKT 241

Query: 246 NGELNKLYQKWLQVDLPK 263
           +G LN + QKWL+ DLPK
Sbjct: 242 DGSLNTIAQKWLKTDLPK 259