Pairwise Alignments

Query, 597 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  234 bits (598), Expect = 6e-66
 Identities = 146/392 (37%), Positives = 223/392 (56%), Gaps = 20/392 (5%)

Query: 203 ALLQQVRLEKEAAERSDLEKSRFLAAASHDLRQPVHAMSLFLGLLANERLSEHGRYLLEN 262
           A L++ +LE   AE+++L K++FLAA SHDL QP++A  LF   L  ER SE    L+ N
Sbjct: 260 ARLREAKLE---AEQANLSKTKFLAAVSHDLLQPLNAARLFTSALL-ERPSET---LVRN 312

Query: 263 ITKASAAMGHLFDALLNISRLDAGVIHPRVQSFPLDRLLDQIRTEYTPQAQQKGLALKVR 322
           ++ +   + +L   L++IS+LDAGVI   +  F L  LLD +  EYT  A+ +GLAL   
Sbjct: 313 VSNSLEDVENLLGTLVDISKLDAGVIKADIAPFALSELLDNLAAEYTELARSEGLALHFV 372

Query: 323 RCAACVRSDPMLLERILRNLVSNAIAHTPHGRVLIGCRKRGDAVRIEVWDTGPGIPKHEH 382
            C+A VRSD  LL RILRNL+SNAI +T +GRV++GCR++   + I+VWD+G GI +   
Sbjct: 373 GCSALVRSDIQLLARILRNLLSNAIRYTYNGRVVLGCRRQHQRLLIQVWDSGMGIAEERL 432

Query: 383 ERVFWEFHQLRNPERDRSKGLGLGLAIVRRTAALLGHTLSLRSVEGRGTVFLLSVDAQQA 442
           E +F EF +      D+ +GLGLGLAIV + A +LGH +S++S  G+G++F + V     
Sbjct: 433 EEIFQEFKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRISVKSWPGKGSMFSVEVPLSAT 492

Query: 443 AAPETPTEANAFAAMQAHAPAISAPPAKPATSQLILVIDDDAQNREGLKLLLESWGHRVI 502
           A    P              A+S P  +      + V+D+DA    G++ LLE WG +VI
Sbjct: 493 APKSLP------------ILAMSEPMLERLQGARVWVLDNDAAICAGMRTLLEGWGCQVI 540

Query: 503 AAPGTAELVELTADVPGKPGLIVSDYRLREHETGVEAIDRLHEEYNDATIPALLVSGDTD 562
            A    +L     +   +  L+++DY L + + GV+A+ R++     A IPAL+++ +  
Sbjct: 541 TALSEQDLARQVDNYHAEADLLIADYHLDDDQNGVDAVARINGRRGRA-IPALMITANYS 599

Query: 563 PARLIEAAARAIPILHKPVEVEALRDWVDKLL 594
                +       ++HKPV    L+  +  LL
Sbjct: 600 NELKQQIRELGHTLMHKPVRPMKLKTAMSHLL 631