Pairwise Alignments

Query, 343 a.a., Hydroxymethylpyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 323 a.a., taurine ABC transporter periplasmic binding subunit from Pseudomonas putida KT2440

 Score = 47.8 bits (112), Expect = 4e-10
 Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 12/194 (6%)

Query: 81  DGVAIIASGRYEVGQVSSSPSIMLAVSQGLPIKCFAVGAQKHPYTYFSLAKNPVRKPADL 140
           D +  +ASG  ++G + SSP +  A ++ LP++ F +  Q        +A++ ++ P DL
Sbjct: 65  DVITAVASGDVQIGYLGSSP-LAAAATRKLPVETFLIATQIGAGEAL-VARDSIKSPQDL 122

Query: 141 VGKRVGIP--STAGILLRALLAKNKIAEKDVKVVSIG--ADMSPLLTGQVDVVTGWLTNT 196
           +GK+V +P  ST    L A L    I    V+++++   A ++    G +D    W    
Sbjct: 123 IGKKVAVPFVSTGHYSLLAALKSWNIDPSKVQILNLAPPAIIAAWKRGDIDATYVWDPAL 182

Query: 197 TAIKVLGPDIASLTQWDAGVRLYALPYYASTKTLETQPKVIEAFLRATAKGWHHVRANRD 256
              K  G  + +  +           +       E  P V++AF + T   +   R +  
Sbjct: 183 GVAKENGKVLITSGELAQKGAPTFDAWIVRKDFAEKHPDVVKAFAKVTLDAYADYRKDPK 242

Query: 257 A------AVDMLVK 264
           A       VD LVK
Sbjct: 243 AWLADKGNVDKLVK 256